RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 AKAP3O75969 853 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 ABLIM3O94929 683 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 P4HBP07237 508 aaKnown RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 CCDC192P0DO97 292 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 CSRP1P21291 193 aaKnown RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 IGFBP6P24592 240 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 TKTP29401 623 aaKnown RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 YWHABP31946 246 aaKnown RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 ELF1P32519 619 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 PXNP49023 591 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 KPNA1P52294 538 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 PPP2R5CQ13362 524 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 CAPSQ13938 189 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 CCINQ13939 588 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 XKR9Q5GH70 373 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 SH3PXD2AQ5TCZ1 1133 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 DAB2IPQ5VWQ8 1189 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 SLC8B1Q6J4K2 584 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 MOXD1Q6UVY6 613 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 ANKS3Q6ZW76 656 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 DHX32Q7L7V1 743 aaKnown RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 OTUD6AQ7L8S5 288 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 RALGPS2Q86X27 583 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 C4orf19Q8IY42 314 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 TCEAL8Q8IYN2 117 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 ZNF461Q8TAF7 563 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 ZSCAN18Q8TBC5 510 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 ASAP3Q8TDY4 903 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 E2F7Q96AV8 911 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 RSPRY1Q96DX4 576 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 ZC3H10Q96K80 434 aaKnown RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 PCMTD1Q96MG8 357 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 KCNK17Q96T54 332 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 LXNQ9BS40 222 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 NFKBIZQ9BYH8 718 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 C22orf23Q9BZE7 217 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 CXCL16Q9H2A7 254 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 VPS54Q9P1Q0 977 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 VAV3Q9UKW4 847 aa7.47□□□□□ -1.21
LRRC28-207ENST00000558500 NAP1L2Q9ULW6 460 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-207ENST00000558500 MYH9P35579 1960 aaKnown RBP7.46□□□□□ -1.21
LRRC28-207ENST00000558500 SMG1Q96Q15 3661 aaKnown RBP7.46□□□□□ -1.21
LRRC28-207ENST00000558500 PRRG1O14668 218 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 ZBTB39O15060 712 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 TRAPPC3O43617 180 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 B3GAT3O94766 335 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 SEC24AO95486 1093 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 CEACAM1P13688 526 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 ATF2P15336 505 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 GJA1P17302 382 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 GLRA2P23416 452 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 CTHP32929 405 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 ARL2P36404 184 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 RBM25P49756 843 aaKnown RBP7.46□□□□□ -1.22
LRRC28-207ENST00000558500 EPHA5P54756 1037 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 FCHO2Q0JRZ9 810 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 PON2Q15165 354 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 EPHA7Q15375 998 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 PLK5Q496M5 336 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 IQCEQ6IPM2 695 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 CD300LGQ6UXG3 332 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 YAF2Q8IY57 180 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 LEMD2Q8NC56 503 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 TTC8Q8TAM2 541 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 FAM200AQ8TCP9 573 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 SLKQ9H2G2 1235 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-207ENST00000558500 CYP4F11Q9HBI6 524 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 SNTG2Q9NY99 539 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 DDX25Q9UHL0 483 aaKnown RBP7.46□□□□□ -1.22
LRRC28-207ENST00000558500 NEUROG3Q9Y4Z2 214 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 INSL5Q9Y5Q6 135 aa7.46□□□□□ -1.22
LRRC28-207ENST00000558500 DOCK6Q96HP0 2047 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 COL4A2P08572 1712 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 BCLAF3A2AJT9 711 aaKnown RBP7.45□□□□□ -1.22
LRRC28-207ENST00000558500 I3L4J1 428 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 TBX3O15119 743 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 SLC37A4O43826 429 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 RECQL4O94761 1208 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 MYL4P12829 197 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 CLCN1P35523 988 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 BRCC3P46736 316 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 CLCNKBP51801 687 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 ARPP19P56211 112 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 NLRP5P59047 1200 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 AKAP17AQ02040 695 aaKnown RBP7.45□□□□□ -1.22
LRRC28-207ENST00000558500 TEAD2Q15562 447 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 SOWAHCQ53LP3 525 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-207ENST00000558500 RNF20Q5VTR2 975 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 DIEXFQ68CQ4 756 aaKnown RBP7.45□□□□□ -1.22
LRRC28-207ENST00000558500 PKN3Q6P5Z2 889 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 SPNS2Q8IVW8 549 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 ELMOD1Q8N336 334 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 SHKBP1Q8TBC3 707 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 DYDC2Q96IM9 177 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 PRIMPOLQ96LW4 560 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 ZNF512Q96ME7 567 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-207ENST00000558500 RNF26Q9BY78 433 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-207ENST00000558500 GPR88Q9GZN0 384 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 DUSP15Q9H1R2 295 aaPredicted RBP7.45□□□□□ -1.22
LRRC28-207ENST00000558500 PDZD7Q9H5P4 517 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms