RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 PCOLCE2Q9UKZ9 415 aa6.59□□□□□ -1.35
FOXN3-218ENST00000557718 PCDHA2Q9Y5H9 948 aa6.59□□□□□ -1.35
FOXN3-218ENST00000557718 LTBP2Q14767 1821 aa6.59□□□□□ -1.35
FOXN3-218ENST00000557718 TDRD15B5MCY1 1934 aaKnown RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 GRIN2DO15399 1336 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 IGKV6-21A0A0C4DH24 114 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 BIN1O00499 593 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 NOP56O00567 594 aaKnown RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 PPFIA4O75335 1185 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 RPN1P04843 607 aaKnown RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 XRCC6P12956 609 aaKnown RBP eCLIP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 FUT4P22083 530 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 MARK3P27448 753 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 CST5P28325 142 aaPredicted RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 CNGA1P29973 690 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 CTCFP49711 727 aaPredicted RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 PURAQ00577 322 aaKnown RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 PRKCQQ04759 706 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 DRP2Q13474 957 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 FSCN1Q16658 493 aaKnown RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 DPCR1Q3MIW9 517 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 MTERF2Q49AM1 385 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 XKR9Q5GH70 373 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 XKR3Q5GH77 459 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 MARCH8Q5T0T0 291 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 FAM160B1Q5W0V3 765 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 ISM2Q6H9L7 571 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 C11orf57Q6ZUT1 292 aaPredicted RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 CTU1Q7Z7A3 348 aaKnown RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 SULF2Q8IWU5 870 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 LINC01465Q8N7H1 131 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 KIAA0895Q8NCT3 520 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 ATP8B4Q8TF62 1192 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 ATP6V0A1Q93050 837 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 BCO2Q9BYV7 579 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 SMARCAD1Q9H4L7 1026 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 DHX33Q9H6R0 707 aaKnown RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 GPRC5CQ9NQ84 441 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 CYP26B1Q9NR63 512 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 DDX20Q9UHI6 824 aaKnown RBP6.58□□□□□ -1.36
FOXN3-218ENST00000557718 DNM3Q9UQ16 869 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 GDAQ9Y2T3 454 aa6.58□□□□□ -1.36
FOXN3-218ENST00000557718 ADGRA3Q8IWK6 1321 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 USO1O60763 962 aaKnown RBP6.57□□□□□ -1.36
FOXN3-218ENST00000557718 HIP1RO75146 1068 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 RHOBTB3O94955 611 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 C22orf31O95567 290 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 C6orf222P0C671 652 aaPredicted RBP6.57□□□□□ -1.36
FOXN3-218ENST00000557718 RARBP10826 455 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 INSRRP14616 1297 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 GUCY2CP25092 1073 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 HOXC8P31273 242 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 HOXD13P35453 343 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 CD96P40200 585 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 CASP5P51878 434 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ZNF131P52739 623 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ASIC1P78348 528 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ADAM17P78536 824 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 STK4Q13043 487 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 COASYQ13057 564 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 KCNB1Q14721 858 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ARHGEF6Q15052 776 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 LRRC41Q15345 812 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 DGKDQ16760 1214 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ZC3H12AQ5D1E8 599 aaKnown RBP6.57□□□□□ -1.36
FOXN3-218ENST00000557718 LRSAM1Q6UWE0 723 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 UNC13DQ70J99 1090 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 SFR1Q86XK3 245 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 GLG1Q92896 1179 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 SMARCE1Q969G3 411 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ISL2Q96A47 359 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 SYAP1Q96A49 352 aaPredicted RBP6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ARMC5Q96C12 935 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ZNF333Q96JL9 665 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 CTAGE1Q96RT6 745 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 AP5M1Q9H0R1 490 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 IKZF4Q9H2S9 585 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 XPNPEP3Q9NQH7 507 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 MBNL3Q9NUK0 354 aaKnown RBP6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ERAP1Q9NZ08 941 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 TCEAL9Q9UHQ7 104 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
FOXN3-218ENST00000557718 COL1A2P08123 1366 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 ZMYM2Q9UBW7 1377 aa6.57□□□□□ -1.36
FOXN3-218ENST00000557718 KIAA1671Q9BY89 1806 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 PVALEFA0A1B0GWK0 134 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 ARHGEF35A5YM69 484 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 HBP1O60381 514 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 DKC1O60832 514 aaKnown RBP eCLIP6.56□□□□□ -1.363e-10■■■■■ 54.2
FOXN3-218ENST00000557718 MAFO75444 373 aaPredicted RBP6.56□□□□□ -1.36
FOXN3-218ENST00000557718 EDN1P05305 212 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 MYL1P05976 194 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 CEACAM5P06731 702 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 ASGR1P07306 291 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 RNASE1P07998 156 aaKnown RBP6.56□□□□□ -1.36
FOXN3-218ENST00000557718 GJB1P08034 283 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 MYL3P08590 195 aa6.56□□□□□ -1.36
FOXN3-218ENST00000557718 SMIM10L2AP0DMW4 78 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms