RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 RAD51AP2Q09MP3 1159 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 STRN3Q13033 797 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 CTXN3Q4LDR2 81 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 FAM78AQ5JUQ0 283 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 ZPBP2Q6X784 338 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 TPRG1Q6ZUI0 275 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 KIAA2013Q8IYS2 634 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 SYT2Q8N9I0 419 aaPredicted RBP17.42■□□□□ 0.38
SCFD1-224ENST00000557713 RUBCNQ92622 972 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 DDX12PQ92771 950 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 TBC1D32Q96NH3 1257 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 HEBP1Q9NRV9 189 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 AFF4Q9UHB7 1163 aaKnown RBP17.42■□□□□ 0.38
SCFD1-224ENST00000557713 MAFFQ9ULX9 164 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 MIA3Q5JRA6 1907 aa17.42■□□□□ 0.38
SCFD1-224ENST00000557713 MOSPD3O75425 235 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 MCM4P33991 863 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 RPS9P46781 194 aaKnown RBP17.41■□□□□ 0.38
SCFD1-224ENST00000557713 SMTNP53814 917 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 SLC12A3P55017 1021 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 ATP2C1P98194 919 aaPredicted RBP17.41■□□□□ 0.38
SCFD1-224ENST00000557713 CSTF1Q05048 431 aaKnown RBP17.41■□□□□ 0.38
SCFD1-224ENST00000557713 MCL1Q07820 350 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCFD1-224ENST00000557713 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 ZNF280DQ6N043 979 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 ZNF852Q6ZMS4 543 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 HS6ST3Q8IZP7 471 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 DCLK2Q8N568 766 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 APPL2Q8NEU8 664 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 NELL1Q92832 810 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 DNASE1L2Q92874 299 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 RMDN1Q96DB5 314 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 ZFP14Q9HCL3 533 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 CEP72Q9P209 647 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 ANKFY1Q9P2R3 1169 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 TUBGCP4Q9UGJ1 667 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 PCDHB8Q9UN66 801 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 CACNA1IQ9P0X4 2223 aa17.41■□□□□ 0.38
SCFD1-224ENST00000557713 PATJQ8NI35 1801 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 M0QZQ0 153 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 NCAM2O15394 837 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 CLDN3O15551 220 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 KINO60870 393 aaKnown RBP17.4■□□□□ 0.38
SCFD1-224ENST00000557713 ZRSR1Q15695 479 aaKnown RBP17.4■□□□□ 0.38
SCFD1-224ENST00000557713 ZBTB6Q15916 424 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 CYP4A22Q5TCH4 519 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 RNF19BQ6ZMZ0 732 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 PDZD4Q76G19 769 aaPredicted RBP17.4■□□□□ 0.38
SCFD1-224ENST00000557713 ZNF687Q8N1G0 1237 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 TMEM130Q8N3G9 435 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 ZNF512Q96ME7 567 aaPredicted RBP17.4■□□□□ 0.38
SCFD1-224ENST00000557713 ZSWIM3Q96MP5 696 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 ASB16Q96NS5 453 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 PLEKHA5Q9HAU0 1116 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 KCND2Q9NZV8 630 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 FRYLO94915 3013 aa17.4■□□□□ 0.38
SCFD1-224ENST00000557713 EP300Q09472 2414 aaPredicted RBP17.39■□□□□ 0.37
SCFD1-224ENST00000557713 TTC26A0AVF1 554 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 OAZ2O95190 189 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 CLTAP09496 248 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 PLA2G4BP0C869 781 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 LRPAP1P30533 357 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 EPHA5P54756 1037 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 TWF1Q12792 350 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 GRM2Q14416 872 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 ARSHQ5FYA8 562 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 IQCEQ6IPM2 695 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 ELMOD1Q8N336 334 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 ZBTB44Q8NCP5 570 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 BEST2Q8NFU1 509 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 KCNN1Q92952 543 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 PLIN2Q99541 437 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 TRMT61BQ9BVS5 477 aaKnown RBP17.39■□□□□ 0.37
SCFD1-224ENST00000557713 TRPV5Q9NQA5 729 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 MRPS17Q9Y2R5 130 aaKnown RBP17.39■□□□□ 0.37
SCFD1-224ENST00000557713 PCDHGA2Q9Y5H1 932 aa17.39■□□□□ 0.37
SCFD1-224ENST00000557713 CITO14578 2027 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 NPHP3-ACAD11A0A0J9YXS1 232 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 SPTLC1O15269 473 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 VNN2O95498 520 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 CXCL8P10145 99 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 CYP3A5P20815 502 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
SCFD1-224ENST00000557713 NCKAP1LP55160 1127 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 SPAG1Q07617 926 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 TMEM119Q4V9L6 283 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 MCTP1Q6DN14 999 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 VITQ6UXI7 678 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 MAP4K3Q8IVH8 894 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 SMARCD2Q92925 531 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 HINFPQ9BQA5 517 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 BRD9Q9H8M2 597 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 TRPV4Q9HBA0 871 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 ZNF334Q9HCZ1 680 aaPredicted RBP17.38■□□□□ 0.37
SCFD1-224ENST00000557713 ZSCAN32Q9NX65 697 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 DMXL1Q9Y485 3027 aa17.38■□□□□ 0.37
SCFD1-224ENST00000557713 PDCD11Q14690 1871 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms