RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 CHMP2AO43633 222 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 TSPAN1O60635 241 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 MAFO75444 373 aaPredicted RBP10.47□□□□□ -0.73
NEDD1-211ENST00000557454 ERLIN2O94905 339 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 SEC24AO95486 1093 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 FOSP01100 380 aaPredicted RBP10.47□□□□□ -0.73
NEDD1-211ENST00000557454 PRKCBP05771 671 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 SRGAP2CP0DJJ0 459 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 FGFR3P22607 806 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 SMARCA1P28370 1054 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 ITPRIPL2Q3MIP1 535 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 IQCEQ6IPM2 695 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 TYW1BQ6NUM6 668 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 NOTUMQ6P988 496 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 TMPRSS7Q7RTY8 843 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 SRGAP1Q7Z6B7 1085 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 ARID3BQ8IVW6 561 aaPredicted RBP10.47□□□□□ -0.73
NEDD1-211ENST00000557454 ELMOD1Q8N336 334 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 TSTD1Q8NFU3 115 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 CHFRQ96EP1 664 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 TRIM6Q9C030 488 aaPredicted RBP10.47□□□□□ -0.73
NEDD1-211ENST00000557454 RIC8AQ9NPQ8 531 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 CEP72Q9P209 647 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 BACE2Q9Y5Z0 518 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 DOPEY2Q9Y3R5 2298 aa10.47□□□□□ -0.73
NEDD1-211ENST00000557454 GOLGA4Q13439 2230 aaKnown RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 TEX51A0A1B0GUA7 166 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 DPYSL4O14531 572 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 IGFBP6P24592 240 aaPredicted RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 U2AF2P26368 475 aaKnown RBP eCLIP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 TKTP29401 623 aaKnown RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 TIE1P35590 1138 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 EPHA5P54756 1037 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 SETQ01105 290 aaPredicted RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 GFPT1Q06210 699 aaPredicted RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 NAIF1Q69YI7 327 aaPredicted RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 WWC2Q6AWC2 1192 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 ANO7Q6IWH7 933 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 LPCAT2Q7L5N7 544 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 NAXDQ8IW45 347 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 HACE1Q8IYU2 909 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 ZNF461Q8TAF7 563 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 ACDQ96AP0 544 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 CCDC51Q96ER9 411 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 DDX27Q96GQ7 796 aaKnown RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 ZNF512Q96ME7 567 aaPredicted RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 ARID3AQ99856 593 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 LZTS2Q9BRK4 669 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 NIFKQ9BYG3 293 aaKnown RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 GPR88Q9GZN0 384 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 CSRNP2Q9H175 543 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 FBRSL1Q9HCM7 1045 aaKnown RBP10.46□□□□□ -0.73
NEDD1-211ENST00000557454 PARP2Q9UGN5 583 aa10.46□□□□□ -0.73
NEDD1-211ENST00000557454 COL5A1P20908 1838 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-211ENST00000557454 A0A1W2PRU2 124 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 TRDMT1O14717 391 aaKnown RBP10.45□□□□□ -0.74
NEDD1-211ENST00000557454 SLC28A2O43868 658 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 DDAH1O94760 285 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 ABLIM3O94929 683 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 STBD1O95210 358 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 ATF2P15336 505 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 ITPKAP23677 461 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 ADCY7P51828 1080 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 NAPAP54920 295 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 ARPP19P56211 112 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 TWF1Q12792 350 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 TRDNQ13061 729 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 AP3B2Q13367 1082 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 TAF1BQ53T94 588 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-211ENST00000557454 XKR3Q5GH77 459 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 COLEC12Q5KU26 742 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 LYSMD4Q5XG99 296 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 PLA2G4FQ68DD2 849 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 SLC8B1Q6J4K2 584 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 GPR155Q7Z3F1 870 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 KRT25Q7Z3Z0 450 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 TCEAL8Q8IYN2 117 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 ZNF654Q8IZM8 581 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 CCDC82Q8N4S0 544 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 LEMD2Q8NC56 503 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 PRPF31Q8WWY3 499 aaKnown RBP10.45□□□□□ -0.74
NEDD1-211ENST00000557454 RLN3Q8WXF3 142 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 FNBP1Q96RU3 617 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 MAP3K14Q99558 947 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 DSCC1Q9BVC3 393 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 SEMA4CQ9C0C4 833 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 CAPN10Q9HC96 672 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 DNAAF2Q9NVR5 837 aaKnown RBP10.45□□□□□ -0.74
NEDD1-211ENST00000557454 PILRBQ9UKJ0 227 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 SLC6A14Q9UN76 642 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 PI4KAP42356 2102 aa10.45□□□□□ -0.74
NEDD1-211ENST00000557454 FAM149AA5PLN7 773 aa10.44□□□□□ -0.74
NEDD1-211ENST00000557454 OTOL1A6NHN0 477 aaPredicted RBP10.44□□□□□ -0.74
NEDD1-211ENST00000557454 B8ZZF3 427 aa10.44□□□□□ -0.74
NEDD1-211ENST00000557454 I3L4J1 428 aa10.44□□□□□ -0.74
NEDD1-211ENST00000557454 NPTXRO95502 500 aa10.44□□□□□ -0.74
NEDD1-211ENST00000557454 PRAMEF12O95522 483 aa10.44□□□□□ -0.74
NEDD1-211ENST00000557454 RXRAP19793 462 aa10.44□□□□□ -0.74
NEDD1-211ENST00000557454 EIF2S3P41091 472 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms