RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MRPS35P82673 323 aaKnown RBP5.71□□□□□ -1.5
VRK1-207ENST00000557352 TARDBPQ13148 414 aaKnown RBP eCLIP5.71□□□□□ -1.5
VRK1-207ENST00000557352 ATP2B3Q16720 1220 aa5.71□□□□□ -1.5
VRK1-207ENST00000557352 CBARPQ8N350 705 aaPredicted RBP5.71□□□□□ -1.5
VRK1-207ENST00000557352 RAB24Q969Q5 203 aa5.71□□□□□ -1.5
VRK1-207ENST00000557352 PUS7LQ9H0K6 701 aaKnown RBP5.71□□□□□ -1.5
VRK1-207ENST00000557352 KCTD5Q9NXV2 234 aa5.71□□□□□ -1.5
VRK1-207ENST00000557352 LRIT1Q9P2V4 623 aa5.71□□□□□ -1.5
VRK1-207ENST00000557352 TUBD1Q9UJT1 453 aa5.71□□□□□ -1.5
VRK1-207ENST00000557352 NDUFS2O75306 463 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 HAUS5O94927 633 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 IARSP41252 1262 aaKnown RBP5.7□□□□□ -1.5
VRK1-207ENST00000557352 PGM2L1Q6PCE3 622 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.7□□□□□ -1.5
VRK1-207ENST00000557352 C1orf162Q8NEQ5 155 aaPredicted RBP5.7□□□□□ -1.5
VRK1-207ENST00000557352 SSH3Q8TE77 659 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 JADE3Q92613 823 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 NELL1Q92832 810 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 PDLIM2Q96JY6 352 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 KIAA1586Q9HCI6 787 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 SAP30BPQ9UHR5 308 aaKnown RBP5.7□□□□□ -1.5
VRK1-207ENST00000557352 DMTF1Q9Y222 760 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 PCDHA13Q9Y5I0 950 aa5.7□□□□□ -1.5
VRK1-207ENST00000557352 IGLV2-14P01704 120 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 SBK3P0C264 359 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 SP5Q6BEB4 398 aaPredicted RBP5.69□□□□□ -1.5
VRK1-207ENST00000557352 NECAB2Q7Z6G3 386 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 RSPH3Q86UC2 560 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 IFI44Q8TCB0 444 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 ACTRT2Q8TDY3 377 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 TMX3Q96JJ7 454 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 TDP1Q9NUW8 608 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 MKS1Q9NXB0 559 aa5.69□□□□□ -1.5
VRK1-207ENST00000557352 TRGV11A0A075B6L2 103 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 GRM6O15303 877 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 AGFG2O95081 481 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 MTHFD1P11586 935 aaKnown RBP5.68□□□□□ -1.5
VRK1-207ENST00000557352 C5AR1P21730 350 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 LMO1P25800 156 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 CACNA2D1P54289 1103 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 CDC42EP1Q00587 391 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 SF3B3Q15393 1217 aaKnown RBP5.68□□□□□ -1.5
VRK1-207ENST00000557352 PABPC1LQ4VXU2 614 aaKnown RBP5.68□□□□□ -1.5
VRK1-207ENST00000557352 MIGA2Q7L4E1 593 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 HDAC10Q969S8 669 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 TLR10Q9BXR5 811 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 SEMA4GQ9NTN9 838 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 VSX1Q9NZR4 365 aaPredicted RBP5.68□□□□□ -1.5
VRK1-207ENST00000557352 ATP8A1Q9Y2Q0 1164 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 IPPQ9Y573 584 aa5.68□□□□□ -1.5
VRK1-207ENST00000557352 A0A1W2PS29 197 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 PCDHGA12O60330 932 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 MATN4O95460 622 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 MT-CO1P00395 513 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 C1RP00736 705 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 ACAP2Q15057 778 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 UTP14CQ5TAP6 766 aaKnown RBP5.67□□□□□ -1.5
VRK1-207ENST00000557352 LRCH2Q5VUJ6 765 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 ZKSCAN2Q63HK3 967 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 ARHGEF25Q86VW2 580 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 IL17RDQ8NFM7 739 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 FAXDC2Q96IV6 333 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 SPATA5L1Q9BVQ7 753 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 PCDHGA9Q9Y5G4 932 aaKnown RBP5.67□□□□□ -1.5
VRK1-207ENST00000557352 PCDHGA8Q9Y5G5 932 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 PCDHGA7Q9Y5G6 932 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 PCDHGA6Q9Y5G7 932 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 PCDHGA3Q9Y5H0 932 aa5.67□□□□□ -1.5
VRK1-207ENST00000557352 HTRA2O43464 458 aaPredicted RBP5.66□□□□□ -1.5
VRK1-207ENST00000557352 SGTAO43765 313 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 PEX1O43933 1283 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 C1QL1O75973 258 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 FOLR3P41439 243 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 SLC16A1P53985 500 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 ZNF280AP59817 542 aaPredicted RBP5.66□□□□□ -1.5
VRK1-207ENST00000557352 IL10RAQ13651 578 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 KIAA0895LQ68EN5 471 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 TMEM125Q96AQ2 219 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 SPC25Q9HBM1 224 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 CTTNBP2NLQ9P2B4 639 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 LIMCH1Q9UPQ0 1083 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 CDYLQ9Y232 598 aa5.66□□□□□ -1.5
VRK1-207ENST00000557352 ARHGEF17Q96PE2 2063 aaPredicted RBP5.65□□□□□ -1.5
VRK1-207ENST00000557352 PRAMEF33A0A0G2JMD5 474 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 KLHL33A6NCF5 533 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 YY2O15391 372 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 PRAMEF10O60809 474 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 SLC43A1O75387 559 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 SRGNP10124 158 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 KCNA2P16389 499 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 GATA3P23771 443 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 EDNRBP24530 442 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 NHLH1Q02575 133 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 C3orf36Q3SXR2 165 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 FLYWCH1Q4VC44 716 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 SYDE2Q5VT97 1194 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 VWA1Q6PCB0 445 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 CLNKQ7Z7G1 428 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 MRGPRX4Q96LA9 322 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 KLHL32Q96NJ5 620 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms