RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 hCG_1984214I3L0E3 225 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 ZNF202O95125 648 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 TTLL1O95922 423 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 TPM3P06753 285 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 VIL1P09327 827 aaKnown RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 DPEP1P16444 411 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 HSPA6P17066 643 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 KCNA3P22001 575 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 MARCKSP29966 332 aaPredicted RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 GNA11P29992 359 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 SYKP43405 635 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 SELENOPP49908 381 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 TOB1P50616 345 aaPredicted RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 NDUFA8P51970 172 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 COL9A2Q14055 689 aaPredicted RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 SLC4A8Q2Y0W8 1093 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 ASPRV1Q53RT3 343 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 DALRD3Q5D0E6 543 aaKnown RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 RESP18Q5W5W9 173 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 STEAP3Q658P3 488 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 IGFL4Q6B9Z1 124 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 POMZP3Q6PJE2 187 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 GPR155Q7Z3F1 870 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 CKAP2LQ8IYA6 745 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 Q8N1Y9 231 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 FAM43AQ8N2R8 423 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 ZNF713Q8N859 430 aaPredicted RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 SLC44A5Q8NCS7 719 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 NUDT10Q8NFP7 164 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 CCDC148Q8NFR7 591 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 OR6P1Q8NGX9 317 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 CPLX3Q8WVH0 158 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 MKL1Q969V6 931 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 NUDT11Q96G61 164 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 PYM1Q9BRP8 204 aaKnown RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 MXD3Q9BW11 206 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 SPZ1Q9BXG8 430 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 ZNF341Q9BYN7 854 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 FTOQ9C0B1 505 aaKnown RBP eCLIP5.04□□□□□ -1.6
SRP54-212ENST00000556992 KANSL2Q9H9L4 492 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 C6orf50Q9HD87 102 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 CYP26B1Q9NR63 512 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 BARHL2Q9NY43 387 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 TMOD2Q9NZR1 351 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 VPS54Q9P1Q0 977 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 CLIP2Q9UDT6 1046 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 FTSJ1Q9UET6 329 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 SEC63Q9UGP8 760 aaKnown RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 MAD2L2Q9UI95 211 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 COA3Q9Y2R0 106 aaPredicted RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 PCDHA2Q9Y5H9 948 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 NUP98P52948 1817 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 BTAF1O14981 1849 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 IGKV6D-41A0A0C4DH26 115 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 CCDC194A0A1B0GVG4 234 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 hCG_1642624A0A1W2PR95 340 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 NPIPB8E9PQR5 432 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 GOLGA6L19H0YKK7 550 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 UBE2Q2LH0YL09 131 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 HGSO14964 777 aaPredicted RBP5.03□□□□□ -1.6
SRP54-212ENST00000556992 ZNF623O75123 536 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 RECKO95980 971 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 SNRPB2P08579 225 aaKnown RBP5.03□□□□□ -1.6
SRP54-212ENST00000556992 PFKFB1P16118 471 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 ATP2B1P20020 1258 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 PRELPP51888 382 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 NFATC3Q12968 1075 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 TRAF1Q13077 416 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 TNIP1Q15025 636 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 DLGAP5Q15398 846 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 STX1AQ16623 288 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 CFAP100Q494V2 611 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 CERKLQ49MI3 558 aaPredicted RBP5.03□□□□□ -1.6
SRP54-212ENST00000556992 GPATCH4Q5T3I0 446 aaKnown RBP5.03□□□□□ -1.6
SRP54-212ENST00000556992 FKBP1CQ5VVH2 108 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 ARL6IP4Q66PJ3 421 aaKnown RBP5.03□□□□□ -1.6
SRP54-212ENST00000556992 TATDN1Q6P1N9 297 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 SHC4Q6S5L8 630 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 USP51Q70EK9 711 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 METTL16Q86W50 562 aaKnown RBP5.03□□□□□ -1.6
SRP54-212ENST00000556992 RBM12BQ8IXT5 1001 aaKnown RBP5.03□□□□□ -1.6
SRP54-212ENST00000556992 NIM1KQ8IY84 436 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 BLIDQ8IZY5 108 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 AGBL3Q8NEM8 1001 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 JDP2Q8WYK2 163 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 CEP95Q96GE4 821 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 PDLIM2Q96JY6 352 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 GLT8D2Q9H1C3 349 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 GOLPH3LQ9H4A5 285 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 RIOX1Q9H6W3 641 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 DDX4Q9NQI0 724 aaKnown RBP5.03□□□□□ -1.6
SRP54-212ENST00000556992 NYAP2Q9P242 653 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 USP25Q9UHP3 1055 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 SYNPO2Q9UMS6 1093 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 HPSEQ9Y251 543 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 CD2APQ9Y5K6 639 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 MRVI1Q9Y6F6 885 aa5.03□□□□□ -1.6
SRP54-212ENST00000556992 SCN7AQ01118 1682 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 TUBGCP6Q96RT7 1819 aa5.02□□□□□ -1.61
SRP54-212ENST00000556992 ANKRD36CQ5JPF3 1778 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms