RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GLUD1P00367 558 aa24.79■■□□□ 1.56
TDP1-216ENST00000556867 GUCY2FP51841 1108 aa24.79■■□□□ 1.56
TDP1-216ENST00000556867 FAM160A1Q05DH4 1040 aa24.79■■□□□ 1.56
TDP1-216ENST00000556867 HS2ST1Q7LGA3 356 aa24.79■■□□□ 1.56
TDP1-216ENST00000556867 ENGASEQ8NFI3 743 aa24.79■■□□□ 1.56
TDP1-216ENST00000556867 CGNQ9P2M7 1197 aaKnown RBP24.79■■□□□ 1.56
TDP1-216ENST00000556867 PRKAG3Q9UGI9 489 aa24.79■■□□□ 1.56
TDP1-216ENST00000556867 C5orf42Q9H799 3197 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 BDP1A6H8Y1 2624 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 RPL17P18621 184 aaKnown RBP24.78■■□□□ 1.56
TDP1-216ENST00000556867 MCM4P33991 863 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 AARSP49588 968 aaKnown RBP eCLIP24.78■■□□□ 1.56
TDP1-216ENST00000556867 WNT7BP56706 349 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 SNW1Q13573 536 aaKnown RBP24.78■■□□□ 1.56
TDP1-216ENST00000556867 KNOP1Q1ED39 458 aaKnown RBP24.78■■□□□ 1.56
TDP1-216ENST00000556867 ANKS3Q6ZW76 656 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 EFCAB13Q8IY85 973 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 CCDC47Q96A33 483 aaKnown RBP24.78■■□□□ 1.56
TDP1-216ENST00000556867 CLSTN3Q9BQT9 956 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 HSPBP1Q9NZL4 362 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 MTRRQ9UBK8 725 aa24.78■■□□□ 1.56
TDP1-216ENST00000556867 RHOBTB3O94955 611 aa24.77■■□□□ 1.56
TDP1-216ENST00000556867 ITIH3Q06033 890 aa24.77■■□□□ 1.56
TDP1-216ENST00000556867 C12orf56Q8IXR9 622 aa24.77■■□□□ 1.56
TDP1-216ENST00000556867 ADAM7Q9H2U9 754 aa24.77■■□□□ 1.56
TDP1-216ENST00000556867 SFXN1Q9H9B4 322 aa24.77■■□□□ 1.56
TDP1-216ENST00000556867 KIAA1586Q9HCI6 787 aa24.77■■□□□ 1.56
TDP1-216ENST00000556867 DPP7Q9UHL4 492 aa24.77■■□□□ 1.56
TDP1-216ENST00000556867 BACE2Q9Y5Z0 518 aa24.77■■□□□ 1.56
TDP1-216ENST00000556867 SCN1AP35498 2009 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 ANO9A1A5B4 782 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 PPEF2O14830 753 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 TGM5O43548 720 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 KCNB1Q14721 858 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 C9orf57Q5W0N0 161 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 LILRA6Q6PI73 481 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 ELMSAN1Q6PJG2 1045 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 GLYCTKQ8IVS8 523 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 ADHFE1Q8IWW8 467 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 HDAC7Q8WUI4 952 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 APOL5Q9BWW9 433 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 MAN1C1Q9NR34 630 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 PCDHB8Q9UN66 801 aa24.76■■□□□ 1.55
TDP1-216ENST00000556867 ZNF233A6NK53 670 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 M0QZQ0 153 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 PAX3P23760 479 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 ZP2Q05996 745 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 CBX2Q14781 532 aaPredicted RBP24.75■■□□□ 1.55
TDP1-216ENST00000556867 VARS2Q5ST30 1063 aaKnown RBP24.75■■□□□ 1.55
TDP1-216ENST00000556867 RARS2Q5T160 578 aaKnown RBP24.75■■□□□ 1.55
TDP1-216ENST00000556867 CES5AQ6NT32 575 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 PALB2Q86YC2 1186 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 CBWD2Q8IUF1 395 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 C12orf76Q8N812 135 aaPredicted RBP24.75■■□□□ 1.55
TDP1-216ENST00000556867 GOLGA5Q8TBA6 731 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 NOC3LQ8WTT2 800 aaKnown RBP24.75■■□□□ 1.55
TDP1-216ENST00000556867 TIGD1Q96MW7 591 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 PLEKHA4Q9H4M7 779 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 DPP3Q9NY33 737 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 MUC3AQ02505 3323 aa24.75■■□□□ 1.55
TDP1-216ENST00000556867 PIRO00625 290 aa24.74■■□□□ 1.55
TDP1-216ENST00000556867 CLIC2O15247 247 aa24.74■■□□□ 1.55
TDP1-216ENST00000556867 ADAM12O43184 909 aa24.74■■□□□ 1.55
TDP1-216ENST00000556867 MRPL58Q14197 206 aaKnown RBP24.74■■□□□ 1.55
TDP1-216ENST00000556867 APPL2Q8NEU8 664 aa24.74■■□□□ 1.55
TDP1-216ENST00000556867 CMASQ8NFW8 434 aaPredicted RBP24.74■■□□□ 1.55
TDP1-216ENST00000556867 POP1Q99575 1024 aaKnown RBP24.74■■□□□ 1.55
TDP1-216ENST00000556867 PDE11AQ9HCR9 933 aa24.74■■□□□ 1.55
TDP1-216ENST00000556867 SPDYE4A6NLX3 237 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 TNFRSF10AO00220 468 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 CYP2J2P51589 502 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 LILRA4P59901 499 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 RAB33AQ14088 237 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 SURF1Q15526 300 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 RSPO2Q6UXX9 243 aaPredicted RBP24.73■■□□□ 1.55
TDP1-216ENST00000556867 XXYLT1Q8NBI6 393 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 CACTINQ8WUQ7 758 aaKnown RBP24.73■■□□□ 1.55
TDP1-216ENST00000556867 NECTIN4Q96NY8 510 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 KCTD10Q9H3F6 313 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 FBXW11Q9UKB1 542 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 C2orf16Q68DN1 1984 aa24.73■■□□□ 1.55
TDP1-216ENST00000556867 C19orf67A6NJJ6 358 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 H7C4K7 107 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 TBC1D4O60343 1298 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 KIF20AO95235 890 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 PAPLNO95428 1278 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 OR1D2P34982 312 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 MTHFRP42898 656 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 TFAMQ00059 246 aaKnown RBP24.72■■□□□ 1.55
TDP1-216ENST00000556867 PNOCQ13519 176 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 SNRNP35Q16560 246 aaKnown RBP24.72■■□□□ 1.55
TDP1-216ENST00000556867 SLC8B1Q6J4K2 584 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 TMC5Q6UXY8 1006 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 KREMEN2Q8NCW0 462 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 TMEM174Q8WUU8 243 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 RIPOR3Q96MK2 946 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 PHF7Q9BWX1 381 aaPredicted RBP24.72■■□□□ 1.55
TDP1-216ENST00000556867 CDH22Q9UJ99 828 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 CDY1Q9Y6F8 540 aa24.72■■□□□ 1.55
TDP1-216ENST00000556867 TSC2P49815 1807 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms