RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 EPSTI1Q96J88 318 aa7.99□□□□□ -1.13
SCFD1-222ENST00000556768 TSPAN18Q96SJ8 248 aa7.99□□□□□ -1.13
SCFD1-222ENST00000556768 RHOBTB2Q9BYZ6 727 aa7.99□□□□□ -1.13
SCFD1-222ENST00000556768 LRRC27Q9C0I9 530 aa7.99□□□□□ -1.13
SCFD1-222ENST00000556768 C11orf16Q9NQ32 467 aa7.99□□□□□ -1.13
SCFD1-222ENST00000556768 TBX20Q9UMR3 447 aa7.99□□□□□ -1.13
SCFD1-222ENST00000556768 SLC27A5Q9Y2P5 690 aa7.99□□□□□ -1.13
SCFD1-222ENST00000556768 LOXHD1Q8IVV2 1947 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 FNDC1Q4ZHG4 1894 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 TMEM221A6NGB7 291 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 C2CD4DB7Z1M9 353 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 H7C4K7 107 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 M0R296 226 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 PODXLO00592 558 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 EDN1P05305 212 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 MYBP10242 640 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 HOXB1P14653 301 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 RPL17P18621 184 aaKnown RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 GBP2P32456 591 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 OR1D2P34982 312 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 PPP2R3AQ06190 1150 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 SLC39A14Q15043 492 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 UVSSAQ2YD98 709 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 XKR4Q5GH76 650 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 SPECC1Q5M775 1068 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 PPM1LQ5SGD2 360 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 KANK3Q6NY19 840 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 PRSS55Q6UWB4 352 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 HFE2Q6ZVN8 426 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 TAS1R3Q7RTX0 852 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 BMP8AQ7Z5Y6 402 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 CEP120Q8N960 986 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 APPL2Q8NEU8 664 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 LNX1Q8TBB1 728 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 FAM200AQ8TCP9 573 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 ZBTB45Q96K62 511 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 SNX27Q96L92 541 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 PRRX2Q99811 253 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 MSTO1Q9BUK6 570 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 PRKD2Q9BZL6 878 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 KCNH6Q9H252 994 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 MRPL44Q9H9J2 332 aaKnown RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 RPF1Q9H9Y2 349 aaKnown RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 WDR6Q9NNW5 1121 aaKnown RBP7.98□□□□□ -1.13
SCFD1-222ENST00000556768 CNTN3Q9P232 1028 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 CACNG4Q9UBN1 327 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 SEL1LQ9UBV2 794 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 POLIQ9UNA4 740 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 EXOC7Q9UPT5 735 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 MTMR6Q9Y217 621 aa7.98□□□□□ -1.13
SCFD1-222ENST00000556768 SYN3O14994 580 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 OGTO15294 1046 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 RFPL2O75678 378 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 F12P00748 615 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-222ENST00000556768 HNRNPA1P09651 372 aaKnown RBP eCLIP7.97□□□□□ -1.13
SCFD1-222ENST00000556768 ZNF16P17020 682 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-222ENST00000556768 GAP43P17677 238 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 FGFR3P22607 806 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 STAT6P42226 847 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 ZNF131P52739 623 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 AMPD3Q01432 767 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 RESTQ13127 1097 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 POSTNQ15063 836 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 PTPAQ15257 358 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 NAB2Q15742 525 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 FAM173BQ6P4H8 233 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 LILRA6Q6PI73 481 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 STXBP4Q6ZWJ1 553 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 DYMQ7RTS9 669 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 CD302Q8IX05 232 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 NXPE3Q969Y0 559 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 CLSTN3Q9BQT9 956 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 SLC4A5Q9BY07 1137 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 MFSD1Q9H3U5 465 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 GOLGA2P5Q9HBQ8 144 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 BLOC1S4Q9NUP1 217 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 IGSF9Q9P2J2 1179 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 CDH22Q9UJ99 828 aa7.97□□□□□ -1.13
SCFD1-222ENST00000556768 FBXO2Q9UK22 296 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-222ENST00000556768 UBQLN1Q9UMX0 589 aaKnown RBP7.97□□□□□ -1.13
SCFD1-222ENST00000556768 ZFP37Q9Y6Q3 630 aaPredicted RBP7.97□□□□□ -1.13
SCFD1-222ENST00000556768 ARHGEF37A1IGU5 675 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 PRRG1O14668 218 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 SPTLC2O15270 562 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 C8AP07357 584 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 IDEP14735 1019 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 PAX3P23760 479 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 MCM4P33991 863 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 SERPINB4P48594 390 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 GTF2BQ00403 316 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 GRIN1Q05586 938 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 TDGQ13569 410 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 NCOA4Q13772 614 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 RAB33AQ14088 237 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 SLC10A6Q3KNW5 377 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 KMT5BQ4FZB7 885 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 SEZ6Q53EL9 994 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 AXDND1Q5T1B0 1012 aaPredicted RBP7.96□□□□□ -1.13
SCFD1-222ENST00000556768 ADALQ6DHV7 355 aa7.96□□□□□ -1.13
SCFD1-222ENST00000556768 USP37Q86T82 979 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms