RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ZNF180Q9UJW8 692 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 HPCAL4Q9UM19 191 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 MED16Q9Y2X0 877 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 CBY1Q9Y3M2 126 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 PCDHB6Q9Y5E3 794 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 COMMD3-BMI1R4GMX3 469 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 WDR97A6NE52 1622 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 KIF21BO75037 1637 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 RAPGEF2Q9Y4G8 1499 aa6.6□□□□□ -1.35
TDP1-215ENST00000556498 KIF21AQ7Z4S6 1674 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8QA0A0J9YX86 632 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8OA6NCC3 632 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8JA6NMD2 632 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 NOTOA8MTQ0 251 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 CENPBD1B2RD01 187 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8NF8WBI6 632 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 FAM229AH3BQW9 127 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 HIP1O00291 1037 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 VWA5AO00534 786 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 MAPK13O15264 365 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 HDAC3O15379 428 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 SLC7A4O43246 635 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 PRPF3O43395 683 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 ADCY3O60266 1144 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 ACSL4O60488 711 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GLRX3O76003 335 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 FARP2O94887 1054 aaPredicted RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 CTSBP07858 339 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GSTT2P0CG29 244 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GSTT2BP0CG30 244 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 HPGDP15428 266 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 ELNP15502 786 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 PRKACAP17612 351 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 CRABP2P29373 138 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 PBLDP30039 288 aaPredicted RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 DNAJA1P31689 397 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 LSP1P33241 339 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 SOX6P35712 828 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 TMED10P49755 219 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 ARHGDIBP52566 201 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 AP3M2P53677 418 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 EIF4A1P60842 406 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 POLR2GP62487 172 aaKnown RBP eCLIP6.59□□□□□ -1.35
TDP1-215ENST00000556498 APBA1Q02410 837 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8FQ08AF8 430 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 GOLGA8DPQ0D2H9 430 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 TBL3Q12788 808 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 TBX2Q13207 712 aaPredicted RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 FRG1Q14331 258 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 CASP8Q14790 479 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 SGO2Q562F6 1265 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 INTS11Q5TA45 600 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 MAP1SQ66K74 1059 aaPredicted RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 CYB5D1Q6P9G0 228 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 C11orf88Q6PI97 169 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 IGF2-ASQ6U949 168 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 OLFM4Q6UX06 510 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 ARHGAP36Q6ZRI8 547 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 PLEKHM3Q6ZWE6 761 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 FAM83AQ86UY5 434 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 CROCCP3Q8IVE0 287 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 TAB3Q8N5C8 712 aaPredicted RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 CNNM3Q8NE01 707 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 PJA1Q8NG27 643 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 CFAP61Q8NHU2 1237 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 ANGPTL6Q8NI99 470 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 NCSTNQ92542 709 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 SLC9A6Q92581 669 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 HSPH1Q92598 858 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 RMDN1Q96DB5 314 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 SCARF2Q96GP6 870 aaPredicted RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 HS6ST2Q96MM7 605 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 RPRD1AQ96P16 312 aaPredicted RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 ACAP3Q96P50 834 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 NUDCD1Q96RS6 583 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 SPON2Q9BUD6 331 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 CCDC106Q9BWC9 280 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 NUSAP1Q9BXS6 441 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 SLC13A1Q9BZW2 595 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 KRT23Q9C075 422 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 MIR1-1HGQ9H1L0 117 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 RAD21L1Q9H4I0 556 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 IFT22Q9H7X7 185 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 SLC40A1Q9NP59 571 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 ZCCHC17Q9NP64 241 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 PFDN4Q9NQP4 134 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 RASSF1Q9NS23 344 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 THAP1Q9NVV9 213 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 MTRRQ9UBK8 725 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 TNFRSF10DQ9UBN6 386 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 MALT1Q9UDY8 824 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 SEC63Q9UGP8 760 aaKnown RBP6.59□□□□□ -1.35
TDP1-215ENST00000556498 MAPRE3Q9UPY8 281 aa6.59□□□□□ -1.35
TDP1-215ENST00000556498 CCDC7Q96M83 1385 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 UBN2Q6ZU65 1347 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 KANSL1LA0AUZ9 987 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 PTPDC1A2A3K4 754 aa6.58□□□□□ -1.36
TDP1-215ENST00000556498 GOLGA8BA8MQT2 603 aa6.58□□□□□ -1.36
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