RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 KLHL23Q8NBE8 558 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 TAS1R2Q8TE23 839 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 HASPINQ8TF76 798 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 IGSF21Q96ID5 467 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 LRCH3Q96II8 777 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 ANKRD36BP1Q96IX9 119 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 UROC1Q96N76 676 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 ZNF558Q96NG5 402 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 TUBGCP2Q9BSJ2 902 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 XYLT2Q9H1B5 865 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 TAB2Q9NYJ8 693 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 LIMA1Q9UHB6 759 aaKnown RBP12.38□□□□□ -0.43
GABRB3-210ENST00000556166 ITGA11Q9UKX5 1188 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 MTUS1Q9ULD2 1270 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.38□□□□□ -0.43
GABRB3-210ENST00000556166 TRIP11Q15643 1979 aa12.38□□□□□ -0.43
GABRB3-210ENST00000556166 BECN2A8MW95 431 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 I3L4J1 428 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 XPOTO43592 962 aaKnown RBP12.37□□□□□ -0.43
GABRB3-210ENST00000556166 B3GAT3O94766 335 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 EEF1GP26641 437 aaKnown RBP12.37□□□□□ -0.43
GABRB3-210ENST00000556166 BRCC3P46736 316 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 FMO5P49326 533 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 AP3M2P53677 418 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 LILRA4P59901 499 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 RBP5P82980 135 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
GABRB3-210ENST00000556166 COLEC11Q9BWP8 271 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 GPR62Q9BZJ7 368 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.43
GABRB3-210ENST00000556166 SPG21Q9NZD8 308 aa12.37□□□□□ -0.43
GABRB3-210ENST00000556166 MAGEC2Q9UBF1 373 aaPredicted RBP12.37□□□□□ -0.43
GABRB3-210ENST00000556166 ANK1P16157 1881 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 C5orf67F2Z3F1 127 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 TMEM189-UBE2V1I3L0A0 370 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 PMM2O15305 246 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 FGF18O76093 207 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 HLA-DRAP01903 254 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 AFPP02771 609 aaKnown RBP12.36□□□□□ -0.43
GABRB3-210ENST00000556166 KRT19P08727 400 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 DNAJB1P25685 340 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 CTNNB1P35222 781 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 BIRC3Q13489 604 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 NCOA4Q13772 614 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 VWA3BQ502W6 1294 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 TIGD5Q53EQ6 642 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 PPP2R2DQ66LE6 453 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 KRT39Q6A163 491 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 USP37Q86T82 979 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 LMO3Q8TAP4 145 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 SPPL3Q8TCT6 385 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 PI4K2AQ9BTU6 479 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 VPS16Q9H269 839 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 TTYH1Q9H313 450 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-210ENST00000556166 APOBEC3GQ9HC16 384 aaKnown RBP12.36□□□□□ -0.43
GABRB3-210ENST00000556166 COQ4Q9Y3A0 265 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 PCDHB12Q9Y5F1 795 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 CITO14578 2027 aa12.36□□□□□ -0.43
GABRB3-210ENST00000556166 RFXAPO00287 272 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 STX10O60499 249 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 PHACTR2O75167 634 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 TADA2AO75478 443 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 CDK11BP21127 795 aaKnown RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 DEKP35659 375 aaKnown RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 MXI1P50539 228 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 CAMK1Q14012 370 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 HABP4Q5JVS0 413 aaKnown RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 DPY19L2P1Q6NXN4 242 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 RNF168Q8IYW5 571 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 HPDLQ96IR7 371 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 B3GALT6Q96L58 329 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 NAP1L5Q96NT1 182 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 NDST4Q9H3R1 872 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 ALG13Q9NP73 1137 aaKnown RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 AAASQ9NRG9 546 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 ADAM28Q9UKQ2 775 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 GRM6O15303 877 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 AP5Z1O43299 807 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 RB1P06400 928 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 PLCB3Q01970 1234 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 APBA1Q02410 837 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 LIMS2Q7Z4I7 341 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 DDX53Q86TM3 631 aaKnown RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 LRRC52Q8N7C0 313 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 ARNTL2Q8WYA1 636 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 CRACR2AQ9BSW2 395 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 ZNF576Q9H609 170 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 RAB20Q9NX57 234 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 POLIQ9UNA4 740 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
GABRB3-210ENST00000556166 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.35□□□□□ -0.43
GABRB3-210ENST00000556166 FSD2A1L4K1 749 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms