RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CES2O00748 559 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 LZTS3O60299 673 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-235ENST00000556082 MSCO60682 206 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 TOM1L1O75674 476 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 MOCS3O95396 460 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 SNAI1O95863 264 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-235ENST00000556082 INHAP05111 366 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 GZMAP12544 262 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 KLRC1P26715 233 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 MSX1P28360 303 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 LAMTOR4Q0VGL1 99 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 TFDP1Q14186 410 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 SURF1Q15526 300 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 ZACNQ401N2 412 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 CST9Q5W186 159 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 FIGNL1Q6PIW4 674 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 CRELD2Q6UXH1 353 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-235ENST00000556082 GPR142Q7Z601 462 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 PLEKHH3Q7Z736 793 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 SLFN11Q7Z7L1 901 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 ALYREFQ86V81 257 aaKnown RBP8.94□□□□□ -0.98
ATXN3-235ENST00000556082 MSANTD4Q8NCY6 345 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 HELQQ8TDG4 1101 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 DHX38Q92620 1227 aaKnown RBP8.94□□□□□ -0.98
ATXN3-235ENST00000556082 SEMA4DQ92854 862 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 CCDC127Q96BQ5 260 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 AGPAT1Q99943 283 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 FAM213AQ9BRX8 229 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 TLR10Q9BXR5 811 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 MRPL4Q9BYD3 311 aaKnown RBP8.94□□□□□ -0.98
ATXN3-235ENST00000556082 FZD8Q9H461 694 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 PDGFCQ9NRA1 345 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 ARGLU1Q9NWB6 273 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-235ENST00000556082 SLC5A4Q9NY91 659 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 SUCLA2Q9P2R7 463 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-235ENST00000556082 RAB21Q9UL25 225 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 CAPN6Q9Y6Q1 641 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 COL1A2P08123 1366 aa8.94□□□□□ -0.98
ATXN3-235ENST00000556082 MANSC4A6NHS7 340 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ACKR2O00590 384 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ENC1O14682 589 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ATP8B1O43520 1251 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 C4BPAP04003 597 aaKnown RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 HOXC6P09630 235 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 TMEM253P0C7T8 217 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 TNFAIP3P21580 790 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 PROZP22891 400 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 HADHBP55084 474 aaKnown RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 INHBEP58166 350 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 PTENP60484 403 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 MAP2K1Q02750 393 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 MCL1Q07820 350 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 VAC14Q08AM6 782 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 UBAP2LQ14157 1087 aaKnown RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 BRD3Q15059 726 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 TLR1Q15399 786 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 MAPK6Q16659 721 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 FAM187BQ17R55 369 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 DUSP28Q4G0W2 176 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 MEI1Q5TIA1 1274 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 FBXO38Q6PIJ6 1188 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 TSHZ1Q6ZSZ6 1077 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 CREG2Q8IUH2 290 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ARHGEF19Q8IW93 802 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ZBTB8OSQ8IWT0 167 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 LINC01465Q8N7H1 131 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 LNX1Q8TBB1 728 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 TAS1R2Q8TE23 839 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 HNRNPLLQ8WVV9 542 aaKnown RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 COPS5Q92905 334 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 MAML3Q96JK9 1138 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 KREMEN1Q96MU8 473 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 NT5C1BQ96P26 610 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 OSBPL9Q96SU4 736 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ACO2Q99798 780 aaKnown RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 MSTO1Q9BUK6 570 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 TARS2Q9BW92 718 aaKnown RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ISCUQ9H1K1 167 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ABHD16BQ9H3Z7 469 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 GPAMQ9HCL2 828 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 HDAC6Q9UBN7 1215 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 HYOU1Q9Y4L1 999 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 V9GYY5 206 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-235ENST00000556082 ARID2Q68CP9 1835 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 WDR81Q562E7 1941 aa8.93□□□□□ -0.98
ATXN3-235ENST00000556082 NCANO14594 1321 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 CNTNAP2Q9UHC6 1331 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 TARSL2A2RTX5 802 aaKnown RBP8.92□□□□□ -0.98
ATXN3-235ENST00000556082 GRID2IPA4D2P6 1211 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 ANKRD62A6NC57 917 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 ABLIM1O14639 778 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 CLDN3O15551 220 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 FAM189A1O60320 539 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 PALMO75781 387 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 C22orf31O95567 290 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 LGALS2P05162 132 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 THBS1P07996 1170 aa8.92□□□□□ -0.98
ATXN3-235ENST00000556082 ZSCAN20P17040 1043 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-235ENST00000556082 ABL2P42684 1182 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms