RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 C9orf57Q5W0N0 161 aa12.91□□□□□ -0.34
APEX1-212ENST00000556054 TTC39CQ8N584 583 aa12.91□□□□□ -0.34
APEX1-212ENST00000556054 HELQQ8TDG4 1101 aa12.91□□□□□ -0.34
APEX1-212ENST00000556054 ZNF689Q96CS4 500 aaPredicted RBP12.91□□□□□ -0.34
APEX1-212ENST00000556054 ZNF560Q96MR9 790 aa12.91□□□□□ -0.34
APEX1-212ENST00000556054 NAA15Q9BXJ9 866 aaKnown RBP12.91□□□□□ -0.34
APEX1-212ENST00000556054 GANQ9H2C0 597 aa12.91□□□□□ -0.34
APEX1-212ENST00000556054 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
APEX1-212ENST00000556054 PLAGL2Q9UPG8 496 aa12.91□□□□□ -0.34
APEX1-212ENST00000556054 PTPRSQ13332 1948 aa12.91□□□□□ -0.34
APEX1-212ENST00000556054 COL4A6Q14031 1691 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 TMEM189-UBE2V1I3L0A0 370 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 FGFR1P11362 822 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 P4HA1P13674 534 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 UCHL3P15374 230 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 TRIM21P19474 475 aaKnown RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 AFF1P51825 1210 aaKnown RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 EPHB4P54760 987 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 GSDMDP57764 484 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 MYL6P60660 151 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 ZBED6P86452 979 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 MLLT1Q03111 559 aaPredicted RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 SOX4Q06945 474 aaPredicted RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 GLRA4Q5JXX5 417 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 PHLDB3Q6NSJ2 640 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 DCLRE1AQ6PJP8 1040 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 TMC6Q7Z403 805 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 PPFIBP1Q86W92 1011 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 CMTR2Q8IYT2 770 aaKnown RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 C18orf25Q96B23 403 aaPredicted RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 PCMTD1Q96MG8 357 aaPredicted RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 SLC9A7Q96T83 725 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.9□□□□□ -0.34
APEX1-212ENST00000556054 TMEM175Q9BSA9 504 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 STK33Q9BYT3 514 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 CYP3A43Q9HB55 503 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 GDAP2Q9NXN4 497 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 ZMYND8Q9ULU4 1186 aaPredicted RBP12.9□□□□□ -0.34
APEX1-212ENST00000556054 AGAP1Q9UPQ3 857 aa12.9□□□□□ -0.34
APEX1-212ENST00000556054 GYPCP04921 128 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 SYN1P17600 705 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
APEX1-212ENST00000556054 HNRNPH3P31942 346 aaKnown RBP12.89□□□□□ -0.35
APEX1-212ENST00000556054 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.35
APEX1-212ENST00000556054 TAF6P49848 677 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 MFAP3P55082 362 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 NOP14P78316 857 aaKnown RBP12.89□□□□□ -0.35
APEX1-212ENST00000556054 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
APEX1-212ENST00000556054 UPP1Q16831 310 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 ZNF699Q32M78 642 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 SV2CQ496J9 727 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 ZNF667Q5HYK9 610 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 DPH6Q7L8W6 267 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 OTOP2Q7RTS6 562 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 DRC7Q8IY82 874 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 LRRC43Q8N309 656 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
APEX1-212ENST00000556054 SPATA18Q8TC71 538 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
APEX1-212ENST00000556054 NIF3L1Q9GZT8 377 aa12.89□□□□□ -0.35
APEX1-212ENST00000556054 FAM207AQ9NSI2 230 aaPredicted RBP12.89□□□□□ -0.35
APEX1-212ENST00000556054 LUC7L2Q9Y383 392 aaKnown RBP12.89□□□□□ -0.35
APEX1-212ENST00000556054 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 GJB5O95377 273 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 POMCP01189 267 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 KRT19P08727 400 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 KLK7P49862 253 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 JAM2P57087 298 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 LILRA4P59901 499 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 YWHAEP62258 255 aaKnown RBP12.88□□□□□ -0.35
APEX1-212ENST00000556054 DEFB103AP81534 67 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
APEX1-212ENST00000556054 SHC3Q92529 594 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 BAP1Q92560 729 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 TATDN2Q93075 761 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 FAM84AQ96KN4 292 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 FAM193BQ96PV7 902 aaPredicted RBP12.88□□□□□ -0.35
APEX1-212ENST00000556054 BCO2Q9BYV7 579 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 APOBEC3GQ9HC16 384 aaKnown RBP12.88□□□□□ -0.35
APEX1-212ENST00000556054 UBE2TQ9NPD8 197 aaPredicted RBP12.88□□□□□ -0.35
APEX1-212ENST00000556054 DNAJC12Q9UKB3 198 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 INPP5FQ9Y2H2 1132 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 SLC4A7Q9Y6M7 1214 aa12.88□□□□□ -0.35
APEX1-212ENST00000556054 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
APEX1-212ENST00000556054 KPNA7A9QM74 516 aa12.87□□□□□ -0.35
APEX1-212ENST00000556054 AKR1B15C9JRZ8 316 aaPredicted RBP12.87□□□□□ -0.35
APEX1-212ENST00000556054 PODXLO00592 558 aa12.87□□□□□ -0.35
APEX1-212ENST00000556054 EPHB6O15197 1021 aa12.87□□□□□ -0.35
APEX1-212ENST00000556054 LRRN2O75325 713 aa12.87□□□□□ -0.35
APEX1-212ENST00000556054 DDHD2O94830 711 aa12.87□□□□□ -0.35
APEX1-212ENST00000556054 ALDH2P05091 517 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms