RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TUBGCP4Q9UGJ1 667 aa15.72■□□□□ 0.11
CHMP4BP1-201ENST00000556017 KMT2BQ9UMN6 2715 aaPredicted RBP15.72■□□□□ 0.11
CHMP4BP1-201ENST00000556017 EPG5Q9HCE0 2579 aa15.72■□□□□ 0.11
CHMP4BP1-201ENST00000556017 ARNTLO00327 626 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 SLC16A4O15374 487 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 MICAL2O94851 1124 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 RPL9P32969 192 aaKnown RBP15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 GRM2Q14416 872 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 ZBTB6Q15916 424 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 WDR44Q5JSH3 913 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 HYIQ5T013 277 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 VITQ6UXI7 678 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 TMEM161BQ8NDZ6 487 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 BEST2Q8NFU1 509 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 LRRC15Q8TF66 581 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 RSPRY1Q96DX4 576 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 TBC1D32Q96NH3 1257 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 ACAP3Q96P50 834 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 CYP4F11Q9HBI6 524 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 KMT5AQ9NQR1 393 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 PCDHGA2Q9Y5H1 932 aa15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 KIF26AQ9ULI4 1882 aaPredicted RBP15.71■□□□□ 0.11
CHMP4BP1-201ENST00000556017 TPRP12270 2363 aaKnown RBP15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 NUP210Q8TEM1 1887 aaPredicted RBP15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SPTLC1O15269 473 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 FAM189A1O60320 539 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 KINO60870 393 aaKnown RBP15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 LRG1P02750 347 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 GJA1P17302 382 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 GUCY2CP25092 1073 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MAGEA9P43362 315 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 YARSP54577 528 aaKnown RBP15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ARPP19P56211 112 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ADCY1Q08828 1119 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MTAPQ13126 283 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DMP1Q13316 513 aaPredicted RBP15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 GAS6Q14393 721 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TPGS2Q68CL5 300 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 RNF19BQ6ZMZ0 732 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SPIRE2Q8WWL2 714 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DDX12PQ92771 950 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DNASE1L2Q92874 299 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DNAJC25Q9H1X3 360 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 EPC1Q9H2F5 836 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TRPV4Q9HBA0 871 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZSCAN32Q9NX65 697 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 AFF4Q9UHB7 1163 aaKnown RBP15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DNM3Q9UQ16 869 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 RBM19Q9Y4C8 960 aaKnown RBP15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DENND4CQ5VZ89 1909 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SCN1AP35498 2009 aa15.7■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TTC26A0AVF1 554 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 M0QZQ0 153 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PRRG1O14668 218 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MAPTP10636 758 aaKnown RBP15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PRPHP41219 470 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 VIPR2P41587 438 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 HMGN5P82970 282 aaKnown RBP15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MCL1Q07820 350 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 RAD51AP2Q09MP3 1159 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PUM1Q14671 1186 aaKnown RBP eCLIP15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 CTXN3Q4LDR2 81 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ARSHQ5FYA8 562 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZNF852Q6ZMS4 543 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MAMSTRQ6ZN01 415 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 APBB1IPQ7Z5R6 666 aaPredicted RBP15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TMC8Q8IU68 726 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DRC1Q96MC2 740 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 NELL2Q99435 816 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 MKNK1Q9BUB5 465 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 CHRDQ9H2X0 955 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 C17orf75Q9HAS0 396 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZNF334Q9HCZ1 680 aaPredicted RBP15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TRPV5Q9NQA5 729 aa15.69■□□□□ 0.1
CHMP4BP1-201ENST00000556017 H7C4K7 107 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TOM1L1O75674 476 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 OAZ2O95190 189 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 HARSP12081 509 aaKnown RBP15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ELF1P32519 619 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SLC12A3P55017 1021 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SPAG1Q07617 926 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 TWF1Q12792 350 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 DGLUCYQ7Z3D6 616 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SHKBP1Q8TBC3 707 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SMARCD2Q92925 531 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 KCNN1Q92952 543 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 LRRC3BQ96PB8 259 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ZFP14Q9HCL3 533 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PARD6AQ9NPB6 346 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 NOL7Q9UMY1 257 aaKnown RBP15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PCDHB8Q9UN66 801 aa15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 SMG5Q9UPR3 1016 aaKnown RBP15.68■□□□□ 0.1
CHMP4BP1-201ENST00000556017 NPHP3-ACAD11A0A0J9YXS1 232 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 PPEF2O14830 753 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 ADRB2P07550 413 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 OR4Q2P0C623 313 aa15.67■□□□□ 0.1
CHMP4BP1-201ENST00000556017 CXCL8P10145 99 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms