RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SEZ6Q53EL9 994 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 COBLL1Q53SF7 1204 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 L1TD1Q5T7N2 865 aaKnown RBP10.46□□□□□ -0.73
ACTN1-215ENST00000555616 FAM171A1Q5VUB5 890 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 SLC39A4Q6P5W5 647 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 PDXDC1Q6P996 788 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 ELMSAN1Q6PJG2 1045 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 DCLRE1AQ6PJP8 1040 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 PRSS55Q6UWB4 352 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-215ENST00000555616 C15orf39Q6ZRI6 1047 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 GPR149Q86SP6 731 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 C12orf76Q8N812 135 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-215ENST00000555616 LNX1Q8TBB1 728 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-215ENST00000555616 HDAC7Q8WUI4 952 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 STRA6Q9BX79 667 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 DNAJC25Q9H1X3 360 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 PLEKHA5Q9HAU0 1116 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 SLC39A2Q9NP94 309 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 MAN1C1Q9NR34 630 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 TBC1D7Q9P0N9 293 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 DPP7Q9UHL4 492 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
ACTN1-215ENST00000555616 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-215ENST00000555616 DENND4AQ7Z401 1863 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 UBE4BO95155 1302 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 PODXLO00592 558 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 OGTO15294 1046 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 EIF3DO15371 548 aaKnown RBP eCLIP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 GPR37L1O60883 481 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ADRB2P07550 413 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 WEE2P0C1S8 567 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 BMP6P22004 513 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 IGFBP6P24592 240 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ERCC5P28715 1186 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 RPL9P32969 192 aaKnown RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 DEKP35659 375 aaKnown RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ZNF165P49910 485 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 PPP2R3AQ06190 1150 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 STK4Q13043 487 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ENOX2Q16206 610 aaKnown RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 PSMD5Q16401 504 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ZC2HC1CQ53FD0 456 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 TMEM31Q5JXX7 168 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ATAT1Q5SQI0 421 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ZBTB41Q5SVQ8 909 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 KLHL10Q6JEL2 608 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 LILRA6Q6PI73 481 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 TMC5Q6UXY8 1006 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 CYP26C1Q6V0L0 522 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ZNF720Q7Z2F6 126 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 SMYD4Q8IYR2 804 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 GUF1Q8N442 669 aaKnown RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 KIAA0895Q8NCT3 520 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 FEZF2Q8TBJ5 459 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 FAM200AQ8TCP9 573 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 HPS3Q969F9 1004 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 C18orf25Q96B23 403 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 DHTKD1Q96HY7 919 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-215ENST00000555616 RPGRIP1Q96KN7 1286 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 TSPAN18Q96SJ8 248 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 BPIFA3Q9BQP9 254 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 PLEKHA4Q9H4M7 779 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 ZDHHC7Q9NXF8 308 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 MTRRQ9UBK8 725 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 TUBGCP4Q9UGJ1 667 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 MUTYHQ9UIF7 546 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 NR2E1Q9Y466 385 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 STYXL1Q9Y6J8 313 aa10.45□□□□□ -0.74
ACTN1-215ENST00000555616 BICDL2A1A5D9 508 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 BECN2A8MW95 431 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 PPP1R3GB7ZBB8 358 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 TGM5O43548 720 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 TRAPPC3O43617 180 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 RPL17P18621 184 aaKnown RBP10.44□□□□□ -0.74
ACTN1-215ENST00000555616 TKTP29401 623 aaKnown RBP10.44□□□□□ -0.74
ACTN1-215ENST00000555616 HOXD11P31277 338 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-215ENST00000555616 TNFSF9P41273 254 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 PRCPP42785 496 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 MATR3P43243 847 aaKnown RBP eCLIP10.44□□□□□ -0.741e-6■■■■□ 23.1
ACTN1-215ENST00000555616 BRCC3P46736 316 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 TPM4P67936 248 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 PAK1Q13153 545 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 ZBTB6Q15916 424 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 C11orf57Q6ZUT1 292 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-215ENST00000555616 CEP57Q86XR8 500 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 ADSSL1Q8N142 457 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 ZNF707Q96C28 371 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-215ENST00000555616 CLSTN3Q9BQT9 956 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 MSTO1Q9BUK6 570 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 RWDD2AQ9UIY3 292 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 FBXW11Q9UKB1 542 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 CPSF3Q9UKF6 684 aaKnown RBP10.44□□□□□ -0.74
ACTN1-215ENST00000555616 MAPK8IP1Q9UQF2 711 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 USTQ9Y2C2 406 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 BACE2Q9Y5Z0 518 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 MYH11P35749 1972 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 PLXNA3P51805 1871 aa10.44□□□□□ -0.74
ACTN1-215ENST00000555616 FAM86C2PA6NEL3 165 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 SPDYE4A6NLX3 237 aa10.43□□□□□ -0.74
ACTN1-215ENST00000555616 SMTNL1A8MU46 457 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms