RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ATP6V1DQ9Y5K8 247 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 CDY1Q9Y6F8 540 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 MTCL1Q9Y4B5 1905 aaKnown RBP22.27■■□□□ 1.16
VTI1B-205ENST00000555543 CCDC195A0A1B0GUA6 201 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 DCXO43602 365 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 TMEM132DQ14C87 1099 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 ANKS3Q6ZW76 656 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 EPM2AIP1Q7L775 607 aaPredicted RBP22.26■■□□□ 1.15
VTI1B-205ENST00000555543 EFCAB13Q8IY85 973 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 CEP57L1Q8IYX8 460 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 TSPAN18Q96SJ8 248 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 PYM1Q9BRP8 204 aaKnown RBP22.26■■□□□ 1.15
VTI1B-205ENST00000555543 FAM213AQ9BRX8 229 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 DPP7Q9UHL4 492 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 BACE2Q9Y5Z0 518 aa22.26■■□□□ 1.15
VTI1B-205ENST00000555543 FAM86C2PA6NEL3 165 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 C2CD4DB7Z1M9 353 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 SYN3O14994 580 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 XPOTO43592 962 aaKnown RBP22.25■■□□□ 1.15
VTI1B-205ENST00000555543 PAPLNO95428 1278 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 GARTP22102 1010 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 RAB33AQ14088 237 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 ELMSAN1Q6PJG2 1045 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 BEST2Q8NFU1 509 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 SCAND2PQ9GZW5 306 aaPredicted RBP22.25■■□□□ 1.15
VTI1B-205ENST00000555543 PCIF1Q9H4Z3 704 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 ASB7Q9H672 318 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 TMEM206Q9H813 350 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 DERAQ9Y315 318 aa22.25■■□□□ 1.15
VTI1B-205ENST00000555543 GOLGA8IPA6NC78 632 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 GOLGA8JA6NMD2 632 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 EIF3DO15371 548 aaKnown RBP eCLIP22.24■■□□□ 1.15
VTI1B-205ENST00000555543 TBC1D4O60343 1298 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 ZMYND10O75800 440 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 AARSP49588 968 aaKnown RBP eCLIP22.24■■□□□ 1.15
VTI1B-205ENST00000555543 MRPL58Q14197 206 aaKnown RBP22.24■■□□□ 1.15
VTI1B-205ENST00000555543 STXBP4Q6ZWJ1 553 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 BRSK2Q8IWQ3 736 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 SMG7Q92540 1137 aaKnown RBP22.24■■□□□ 1.15
VTI1B-205ENST00000555543 PAGE5Q96GU1 130 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 C1QTNF1Q9BXJ1 281 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 ZDHHC7Q9NXF8 308 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 PCDHB8Q9UN66 801 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 C2CD2Q9Y426 696 aa22.24■■□□□ 1.15
VTI1B-205ENST00000555543 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.24■■□□□ 1.15
VTI1B-205ENST00000555543 FAM237AA0A1B0GTK4 181 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 M0QZQ0 153 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 KLRC4O43908 158 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 ALADP13716 330 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 NDUFA8P51970 172 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 POU5F1Q01860 360 aaKnown RBP22.23■■□□□ 1.15
VTI1B-205ENST00000555543 C9orf57Q5W0N0 161 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 ARMCX5Q6P1M9 558 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 ZNF507Q8TCN5 953 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 SCFD1Q8WVM8 642 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 FAM84AQ96KN4 292 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 RHOBTB2Q9BYZ6 727 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 GOLPH3LQ9H4A5 285 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 NR2E1Q9Y466 385 aa22.23■■□□□ 1.15
VTI1B-205ENST00000555543 PVALEFA0A1B0GWK0 134 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 ANO9A1A5B4 782 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 SPTLC1O15269 473 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 C8AP07357 584 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 ROR1Q01973 937 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 SLC8B1Q6J4K2 584 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 CCDC149Q6ZUS6 474 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 PRKD2Q9BZL6 878 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 SLC39A2Q9NP94 309 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 RBAKQ9NYW8 714 aaPredicted RBP22.22■■□□□ 1.15
VTI1B-205ENST00000555543 FBXL5Q9UKA1 691 aa22.22■■□□□ 1.15
VTI1B-205ENST00000555543 TIMM13Q9Y5L4 95 aaPredicted RBP22.22■■□□□ 1.15
VTI1B-205ENST00000555543 A0A1W2PQ27 194 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 A0A1W2PQ64 194 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 A0A1W2PQD8 194 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 WDR27A2RRH5 827 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 PIRO00625 290 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 TGFB1I1O43294 461 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 EXTL3O43909 919 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 IL18RAPO95256 599 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 SYKP43405 635 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 LILRA4P59901 499 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 LIN9Q5TKA1 542 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 NELFCDQ8IXH7 590 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 FSIP1Q8NA03 581 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 TDRD5Q8NAT2 981 aaKnown RBP22.21■■□□□ 1.15
VTI1B-205ENST00000555543 SLC7A14Q8TBB6 771 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 NOC3LQ8WTT2 800 aaKnown RBP22.21■■□□□ 1.15
VTI1B-205ENST00000555543 WDR6Q9NNW5 1121 aaKnown RBP22.21■■□□□ 1.15
VTI1B-205ENST00000555543 USTQ9Y2C2 406 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 CLUHO75153 1309 aa22.21■■□□□ 1.15
VTI1B-205ENST00000555543 TSC2P49815 1807 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 SCN1AP35498 2009 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 H7C4K7 107 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 N4BP1O75113 896 aaKnown RBP22.2■■□□□ 1.14
VTI1B-205ENST00000555543 LDHAP00338 332 aaKnown RBP22.2■■□□□ 1.14
VTI1B-205ENST00000555543 ARPP19P56211 112 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 CTXN3Q4LDR2 81 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 ZNF280DQ6N043 979 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 CYP26C1Q6V0L0 522 aa22.2■■□□□ 1.14
VTI1B-205ENST00000555543 GPD1LQ8N335 351 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms