RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 PTGDRQ13258 359 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 MRPL58Q14197 206 aaKnown RBP16.92■□□□□ 0.3
NEDD1-207ENST00000555114 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.3
NEDD1-207ENST00000555114 FAM78AQ5JUQ0 283 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 C4orf32Q8N8J7 132 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 SMARCD2Q92925 531 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 ZMAT2Q96NC0 199 aaKnown RBP16.92■□□□□ 0.3
NEDD1-207ENST00000555114 OXCT2Q9BYC2 517 aaPredicted RBP16.92■□□□□ 0.3
NEDD1-207ENST00000555114 GPR88Q9GZN0 384 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 EPC1Q9H2F5 836 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 PRMT8Q9NR22 394 aaPredicted RBP16.92■□□□□ 0.3
NEDD1-207ENST00000555114 ASAH2Q9NR71 780 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 ANKFY1Q9P2R3 1169 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 GMEB2Q9UKD1 530 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 RAB23Q9ULC3 237 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 ZNF292O60281 2723 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 CACNA1AO00555 2505 aa16.92■□□□□ 0.3
NEDD1-207ENST00000555114 MED19A0JLT2 244 aaPredicted RBP16.91■□□□□ 0.3
NEDD1-207ENST00000555114 PRR5-ARHGAP8B1AHC4 643 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 TOM1L1O75674 476 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 PSMC3P17980 439 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 ARHGAP8P85298 464 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 LMNB2Q03252 620 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 TWF1Q12792 350 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 PLD1Q13393 1074 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 GRM2Q14416 872 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 RSPO4Q2I0M5 234 aaPredicted RBP16.91■□□□□ 0.3
NEDD1-207ENST00000555114 RINT1Q6NUQ1 792 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 DTHD1Q6ZMT9 781 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 DDX12PQ92771 950 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 E2F7Q96AV8 911 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 TCEAL4Q96EI5 215 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 ASB16Q96NS5 453 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 TRPV5Q9NQA5 729 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 SH2B1Q9NRF2 756 aaPredicted RBP16.91■□□□□ 0.3
NEDD1-207ENST00000555114 NDRG2Q9UN36 371 aaKnown RBP16.91■□□□□ 0.3
NEDD1-207ENST00000555114 PCDHB8Q9UN66 801 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 NOTCH4Q99466 2003 aa16.91■□□□□ 0.3
NEDD1-207ENST00000555114 H0YCG3 227 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 SLC16A4O15374 487 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 LILRB5O75023 590 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 SEC24AO95486 1093 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 MYL4P12829 197 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 FCARP24071 287 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 GDI1P31150 447 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 PRPHP41219 470 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
NEDD1-207ENST00000555114 MTAPQ13126 283 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 NBR1Q14596 966 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 C1orf228Q6PIY5 440 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 TAS1R3Q7RTX0 852 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 DAW1Q8N136 415 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 KCTD17Q8N5Z5 321 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 SPIRE2Q8WWL2 714 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 FAM3CQ92520 227 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 NELL1Q92832 810 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 C18orf25Q96B23 403 aaPredicted RBP16.9■□□□□ 0.3
NEDD1-207ENST00000555114 MSANTD3Q96H12 275 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 TBC1D32Q96NH3 1257 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 RUSC1Q9BVN2 902 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 CHRDQ9H2X0 955 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 SLITRK6Q9H5Y7 841 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 PATJQ8NI35 1801 aa16.9■□□□□ 0.3
NEDD1-207ENST00000555114 DCHS1Q96JQ0 3298 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 ZNF263O14978 683 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 CLDN3O15551 220 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 XPOTO43592 962 aaKnown RBP16.89■□□□□ 0.29
NEDD1-207ENST00000555114 PLS3P13797 630 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 GUCY2CP25092 1073 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.29
NEDD1-207ENST00000555114 CCR3P51677 355 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 YWHAHQ04917 246 aaPredicted RBP16.89■□□□□ 0.29
NEDD1-207ENST00000555114 ZRSR1Q15695 479 aaKnown RBP16.89■□□□□ 0.29
NEDD1-207ENST00000555114 TSSK4Q6SA08 328 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 ZPBP2Q6X784 338 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 C1orf186Q6ZWK4 172 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 USP37Q86T82 979 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 YAF2Q8IY57 180 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 NTPCRQ9BSD7 190 aaKnown RBP16.89■□□□□ 0.29
NEDD1-207ENST00000555114 PLEKHA5Q9HAU0 1116 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 ZNF334Q9HCZ1 680 aaPredicted RBP16.89■□□□□ 0.29
NEDD1-207ENST00000555114 KCND2Q9NZV8 630 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 CDV3Q9UKY7 258 aaKnown RBP16.89■□□□□ 0.29
NEDD1-207ENST00000555114 USP18Q9UMW8 372 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 KIF3AQ9Y496 699 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 PIAS3Q9Y6X2 628 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 TRIP11Q15643 1979 aa16.89■□□□□ 0.29
NEDD1-207ENST00000555114 COL4A3Q01955 1670 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 ABLIM1O14639 778 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 CCR2P41597 374 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 MAPK7Q13164 816 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 KYAT1Q16773 422 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 SLC10A6Q3KNW5 377 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 VITQ6UXI7 678 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 MAMSTRQ6ZN01 415 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 MAP4K3Q8IVH8 894 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 ZSCAN18Q8TBC5 510 aaPredicted RBP16.88■□□□□ 0.29
NEDD1-207ENST00000555114 CSGALNACT1Q8TDX6 532 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 BICD1Q96G01 975 aa16.88■□□□□ 0.29
NEDD1-207ENST00000555114 CDK5RAP3Q96JB5 506 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms