RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	KCNA3	P22001	575 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	HIBADH	P31937	336 aa	Known RBP	6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	MRPS9	P82933	396 aa	Known RBP	6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	HHEX	Q03014	270 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	MUM1	Q2TAK8	710 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	LCE5A	Q5TCM9	118 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	ZNF530	Q6P9A1	599 aa	Predicted RBP	6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956		Q6ZRM9	215 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	ELOA2	Q8IYF1	753 aa	Predicted RBP	6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	MB21D1	Q8N884	522 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	OR5M3	Q8NGP4	307 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	AUTS2	Q8WXX7	1259 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	EXTL1	Q92935	676 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	ZNF512	Q96ME7	567 aa	Predicted RBP	6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	DNAJC28	Q9NX36	388 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	SRP68	Q9UHB9	627 aa	Known RBP	6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	MYRF	Q9Y2G1	1151 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	TESMIN	Q9Y4I5	508 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	PKD1L3	Q7Z443	1732 aa		6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	MAP2	P11137	1827 aa	Known RBP	6.69	□□□□□ -1.34
PSMC6-208	ENST00000554956	hCG_2014768	A0A024R1R8	64 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	RPS6KA4	O75676	772 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	DPEP1	P16444	411 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	TNFRSF1A	P19438	455 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	CTSS	P25774	331 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	DUSP2	Q05923	314 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	DDR1	Q08345	913 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	PLEKHO1	Q53GL0	409 aa	Predicted RBP	6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	USP39	Q53GS9	565 aa	Known RBP	6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	SULT6B1	Q6IMI4	303 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	LILRA3	Q8N6C8	439 aa	Predicted RBP	6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	GLB1L3	Q8NCI6	653 aa	Predicted RBP	6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	IFT122	Q9HBG6	1241 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	DMRT3	Q9NQL9	472 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	COL4A3BP	Q9Y5P4	624 aa		6.68	□□□□□ -1.34
PSMC6-208	ENST00000554956	KIF20B	Q96Q89	1820 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	NRP1	O14786	923 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	ACRV1	P26436	265 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	IARS	P41252	1262 aa	Known RBP	6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	CRKL	P46109	303 aa	Known RBP	6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	MTHFS	P49914	203 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	IGBP1	P78318	339 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	FAP	Q12884	760 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	NRN1L	Q496H8	165 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	NECAB2	Q7Z6G3	386 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	MORC1	Q86VD1	984 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	PRPF38A	Q8NAV1	312 aa	Known RBP	6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	SNX33	Q8WV41	574 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	PCDH12	Q9NPG4	1184 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	ANKRD26	Q9UPS8	1709 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	C10orf71	Q711Q0	1435 aa		6.67	□□□□□ -1.34
PSMC6-208	ENST00000554956	CHD4	Q14839	1912 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956		K7ESF4	209 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	ADCY6	O43306	1168 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	KATNA1	O75449	491 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	HSPA6	P17066	643 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	SCNN1G	P51170	649 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	GUCY2F	P51841	1108 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	WNT3A	P56704	352 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	TGFB2	P61812	414 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	MEF2A	Q02078	507 aa	Predicted RBP	6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	KLF1	Q13351	362 aa	Predicted RBP	6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	SLC39A6	Q13433	755 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	ADRM1	Q16186	407 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	DBX2	Q6ZNG2	339 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	RNF207	Q6ZRF8	634 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	DNAJC10	Q8IXB1	793 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	CBARP	Q8N350	705 aa	Predicted RBP	6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	IL17D	Q8TAD2	202 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	MIEF2	Q96C03	454 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	PGBD4	Q96DM1	585 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	BORCS6	Q96GS4	357 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	SLC2A13	Q96QE2	648 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	ACE2	Q9BYF1	805 aa	Predicted RBP	6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	EPC1	Q9H2F5	836 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	GIT1	Q9Y2X7	761 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	CLSPN	Q9HAW4	1339 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	ITGB4	P16144	1822 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	TAF1L	Q8IZX4	1826 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	UBR3	Q6ZT12	1888 aa		6.66	□□□□□ -1.34
PSMC6-208	ENST00000554956	HOXA3	O43365	443 aa	Predicted RBP	6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	ITGA10	O75578	1167 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	MT-CO1	P00395	513 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	HSP90AB1	P08238	724 aa	Known RBP	6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	HMOX1	P09601	288 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	HMGB2	P26583	209 aa	Known RBP	6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	CHRNA5	P30532	468 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	ADSL	P30566	484 aa	Predicted RBP	6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	RFC4	P35249	363 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	MTNR1B	P49286	362 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	PRELP	P51888	382 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	CRHR2	Q13324	411 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	MTMR1	Q13613	665 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	RRP1B	Q14684	758 aa	Known RBP	6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	AMOT	Q4VCS5	1084 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	C1QL3	Q5VWW1	255 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	BTNL9	Q6UXG8	535 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	ANKRD35	Q8N283	1001 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	MDM1	Q8TC05	714 aa		6.65	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms