RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 EDEM3Q9BZQ6 932 aa10.38□□□□□ -0.75
MARK3-208ENST00000554627 CEP72Q9P209 647 aa10.38□□□□□ -0.75
MARK3-208ENST00000554627 APEX2Q9UBZ4 518 aa10.38□□□□□ -0.75
MARK3-208ENST00000554627 TUBGCP4Q9UGJ1 667 aa10.38□□□□□ -0.75
MARK3-208ENST00000554627 A0A1W2PQJ5 194 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 ARHGEF37A1IGU5 675 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 DGKIO75912 1065 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 UPP2O95045 317 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 VNN1O95497 513 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 ASS1P00966 412 aaKnown RBP10.37□□□□□ -0.75
MARK3-208ENST00000554627 POMCP01189 267 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 NOP14P78316 857 aaKnown RBP10.37□□□□□ -0.75
MARK3-208ENST00000554627 KCNMA1Q12791 1236 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 SV2CQ496J9 727 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 ZNF667Q5HYK9 610 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 TMEM240Q5SV17 173 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 C9orf57Q5W0N0 161 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 CACNA2D4Q7Z3S7 1137 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 PHOSPHO2Q8TCD6 241 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 C18orf25Q96B23 403 aaPredicted RBP10.37□□□□□ -0.75
MARK3-208ENST00000554627 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.753e-6■□□□□ 10.1
MARK3-208ENST00000554627 NUCKS1Q9H1E3 243 aaKnown RBP10.37□□□□□ -0.75
MARK3-208ENST00000554627 FAM124BQ9H5Z6 455 aaPredicted RBP10.37□□□□□ -0.75
MARK3-208ENST00000554627 VRTNQ9H8Y1 702 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 FAM207AQ9NSI2 230 aaPredicted RBP10.37□□□□□ -0.75
MARK3-208ENST00000554627 TBC1D13Q9NVG8 400 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 AGAP1Q9UPQ3 857 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 PLXNA4Q9HCM2 1894 aa10.37□□□□□ -0.75
MARK3-208ENST00000554627 ANO9A1A5B4 782 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 TBKBP1A7MCY6 615 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 PODXLO00592 558 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 SLC9A1P19634 815 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 TAF6P49848 677 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 MFAP3P55082 362 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 GSDMDP57764 484 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 MYL6P60660 151 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 YWHAEP62258 255 aaKnown RBP10.36□□□□□ -0.75
MARK3-208ENST00000554627 DEFB103AP81534 67 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 GCNT1Q02742 428 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 NAB2Q15742 525 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 KLHDC7AQ5VTJ3 777 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 C16orf59Q7L2K0 433 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 CNGA4Q8IV77 575 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 CMTR2Q8IYT2 770 aaKnown RBP10.36□□□□□ -0.75
MARK3-208ENST00000554627 PPM1KQ8N3J5 372 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 TTC39CQ8N584 583 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 LMO3Q8TAP4 145 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 SEMA4DQ92854 862 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 JAKMIP2Q96AA8 810 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 HPDLQ96IR7 371 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 CASD1Q96PB1 797 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 TMEM175Q9BSA9 504 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 NIF3L1Q9GZT8 377 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 RNF19AQ9NV58 838 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 SIX4Q9UIU6 781 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 MYO6Q9UM54 1294 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 PLAGL2Q9UPG8 496 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 SLC4A7Q9Y6M7 1214 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 PTPRDP23468 1912 aa10.36□□□□□ -0.75
MARK3-208ENST00000554627 PIRO00625 290 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 UCHL3P15374 230 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 MAGEA10P43363 369 aaPredicted RBP10.35□□□□□ -0.75
MARK3-208ENST00000554627 TNNC1P63316 161 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 DSC1Q08554 894 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 UPP1Q16831 310 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
MARK3-208ENST00000554627 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 PDLIM2Q96JY6 352 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 SPAG5Q96R06 1193 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 YME1L1Q96TA2 773 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 ZBED2Q9BTP6 218 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 DNAI2Q9GZS0 605 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 CXCL16Q9H2A7 254 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 GANQ9H2C0 597 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 MIOSQ9NXC5 875 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 LUC7L2Q9Y383 392 aaKnown RBP10.35□□□□□ -0.75
MARK3-208ENST00000554627 TNRC18O15417 2968 aaPredicted RBP10.35□□□□□ -0.75
MARK3-208ENST00000554627 CASTOR2A6NHX0 329 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 TMEM189-UBE2V1I3L0A0 370 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 NRDCO43847 1150 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 GJB5O95377 273 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 CST3P01034 146 aaPredicted RBP10.35□□□□□ -0.75
MARK3-208ENST00000554627 GYPCP04921 128 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 CCDC172P0C7W6 258 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 KLK7P49862 253 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 CLCNKBP51801 687 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 GUCY2FP51841 1108 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 POLR2FP61218 127 aaKnown RBP10.35□□□□□ -0.75
MARK3-208ENST00000554627 ZBED6P86452 979 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 SOX4Q06945 474 aaPredicted RBP10.35□□□□□ -0.75
MARK3-208ENST00000554627 LRMPQ12912 555 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 CUL2Q13617 745 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 RAPGEF1Q13905 1077 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 WDR72Q3MJ13 1102 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 DCLRE1AQ6PJP8 1040 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 COLGALT2Q8IYK4 626 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 SPC24Q8NBT2 197 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 ZNF689Q96CS4 500 aaPredicted RBP10.35□□□□□ -0.75
MARK3-208ENST00000554627 FAM84AQ96KN4 292 aa10.35□□□□□ -0.75
MARK3-208ENST00000554627 PI4K2AQ9BTU6 479 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms