RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ADAM12O43184 909 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 FAM189A1O60320 539 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 NFICP08651 508 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 PFKFB1P16118 471 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 CYP3A5P20815 502 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 PPM1LQ5SGD2 360 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 VARS2Q5ST30 1063 aaKnown RBP11.57□□□□□ -0.56
SHMT2-213ENST00000554600 ARMCX5Q6P1M9 558 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 CD300LGQ6UXG3 332 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 DSTYKQ6XUX3 929 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 CCDC149Q6ZUS6 474 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 UNC13DQ70J99 1090 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 GRAMD1CQ8IYS0 662 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 TDRD5Q8NAT2 981 aaKnown RBP11.57□□□□□ -0.56
SHMT2-213ENST00000554600 GLIS3Q8NEA6 775 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 APPL2Q8NEU8 664 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 FEZF2Q8TBJ5 459 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 HDAC7Q8WUI4 952 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 SUSD3Q96L08 255 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 C7orf25Q9BPX7 421 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 FAM213AQ9BRX8 229 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 STRA6Q9BX79 667 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 SCAND2PQ9GZW5 306 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-213ENST00000554600 MTRRQ9UBK8 725 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 POLIQ9UNA4 740 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-213ENST00000554600 STYXL1Q9Y6J8 313 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 ZDBF2Q9HCK1 2354 aa11.57□□□□□ -0.56
SHMT2-213ENST00000554600 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 PI4K2BG5E9Z4 385 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 IL18RAPO95256 599 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 LDHAP00338 332 aaKnown RBP11.56□□□□□ -0.56
SHMT2-213ENST00000554600 C8AP07357 584 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 CMA1P23946 247 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 ADSSP30520 456 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 NUCB2P80303 420 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 CUL4BQ13620 913 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 ZBTB6Q15916 424 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 CTXN3Q4LDR2 81 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 TMEM31Q5JXX7 168 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 ZNF280DQ6N043 979 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 LILRA6Q6PI73 481 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 C15orf39Q6ZRI6 1047 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 USP37Q86T82 979 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 FSIP1Q8NA03 581 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 CMASQ8NFW8 434 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-213ENST00000554600 ACSF2Q96CM8 615 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-213ENST00000554600 CBWD1Q9BRT8 395 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 ASB7Q9H672 318 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 GDPD2Q9HCC8 539 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 FBXW11Q9UKB1 542 aa11.56□□□□□ -0.56
SHMT2-213ENST00000554600 GOLGA6L4A6NEF3 574 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 PPEF2O14830 753 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 EIF3DO15371 548 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHMT2-213ENST00000554600 CCL16O15467 120 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 ACTN4O43707 911 aaKnown RBP11.55□□□□□ -0.56
SHMT2-213ENST00000554600 EXTL3O43909 919 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 ZMYND10O75800 440 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 SLFN14P0C7P3 912 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 CPB1P15086 417 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 GARTP22102 1010 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 LRPAP1P30533 357 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 GBP2P32456 591 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-213ENST00000554600 ELF1P32519 619 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 SYKP43405 635 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 TFAMQ00059 246 aaKnown RBP11.55□□□□□ -0.56
SHMT2-213ENST00000554600 RAB33AQ14088 237 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 SPATA1Q5VX52 437 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 C9orf57Q5W0N0 161 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 RSPO2Q6UXX9 243 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-213ENST00000554600 OTOP3Q7RTS5 596 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 NELFCDQ8IXH7 590 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 GPD1LQ8N335 351 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 ZSWIM2Q8NEG5 633 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 SLC7A14Q8TBB6 771 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 SLC39A2Q9NP94 309 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 EXOC1Q9NV70 894 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 ZDHHC7Q9NXF8 308 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 DPP3Q9NY33 737 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 RBAKQ9NYW8 714 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-213ENST00000554600 USP25Q9UHP3 1055 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 DERAQ9Y315 318 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 TIMM13Q9Y5L4 95 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-213ENST00000554600 BACE2Q9Y5Z0 518 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 CLUHO75153 1309 aa11.55□□□□□ -0.56
SHMT2-213ENST00000554600 PVALEFA0A1B0GWK0 134 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 PRRG1O14668 218 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 XYLBO75191 536 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 C1RP00736 705 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 ADRB2P07550 413 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 CYP2J2P51589 502 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 NDUFA8P51970 172 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 ROR1Q01973 937 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 YWHAHQ04917 246 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-213ENST00000554600 CNNM4Q6P4Q7 775 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 CRELD2Q6UXH1 353 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-213ENST00000554600 CYP26C1Q6V0L0 522 aa11.54□□□□□ -0.56
SHMT2-213ENST00000554600 BRSK2Q8IWQ3 736 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms