RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 HP1BP3Q5SSJ5 553 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZBTB33Q86T24 672 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ARHGEF2Q92974 986 aaKnown RBP16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZNF317Q96PQ6 595 aaPredicted RBP16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 PDLIM7Q9NR12 457 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 DKC1O60832 514 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■■■■■ 30
ARHGEF40-203ENST00000554514 EDN1P05305 212 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 CNTN2Q02246 1040 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 CUL2Q13617 745 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 PSMD6Q15008 389 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 LIN9Q5TKA1 542 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZNF365Q70YC5 407 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 ANKS1BQ7Z6G8 1248 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 C9orf72Q96LT7 481 aa16.69■□□□□ 0.26
ARHGEF40-203ENST00000554514 GSTTP1A0A1W2PQM5 241 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 TLR3O15455 904 aaKnown RBP16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 KRT10P13645 584 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 TCF4P15884 667 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 ATF7P17544 494 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 PTPRAP18433 802 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 ATP4AP20648 1035 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 GLRA2P23416 452 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 XKR3Q5GH77 459 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 CRELD2Q6UXH1 353 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 MON1BQ7L1V2 547 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 TAOK1Q7L7X3 1001 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 DEFB132Q7Z7B7 95 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 SCYL3Q8IZE3 742 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 RBBP8NLQ8NC74 664 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 HAUS1Q96CS2 278 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZNF668Q96K58 619 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 SENP7Q9BQF6 1050 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 SLC40A1Q9NP59 571 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZNF302Q9NR11 478 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 PIM2Q9P1W9 311 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 HGSO14964 777 aaPredicted RBP16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 PROSCO94903 275 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 SUPT20HL2P0C7V6 817 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 GNPTABQ3T906 1256 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 CAPN12Q6ZSI9 719 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 EEPD1Q7L9B9 569 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 C3orf20Q8ND61 904 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 SAMD15Q9P1V8 674 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 WHRNQ9P202 907 aa16.68■□□□□ 0.26
ARHGEF40-203ENST00000554514 SCTRP47872 440 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 RPL7AP62424 266 aaKnown RBP16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 NOP14P78316 857 aaKnown RBP16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 CENPCQ03188 943 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 CYP4F22Q6NT55 531 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 TRMT10CQ7L0Y3 403 aaKnown RBP16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 REPS2Q8NFH8 660 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 CENPTQ96BT3 561 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 TCHPQ9BT92 498 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 STMN4Q9H169 189 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 ACAD9Q9H845 621 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 GGA2Q9UJY4 613 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 COL11A1P12107 1806 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 TMEM120BA0PK00 339 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 TTLL13PA6NNM8 815 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 ITIH2P19823 946 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 MAMLD1Q13495 774 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 CNGA2Q16280 664 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 OSBPL8Q9BZF1 889 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 CD248Q9HCU0 757 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 AVENQ9NQS1 362 aaPredicted RBP16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 WDR81Q562E7 1941 aa16.67■□□□□ 0.26
ARHGEF40-203ENST00000554514 MAFGO15525 162 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZC3H11AO75152 810 aaKnown RBP eCLIP16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 CYP1A1P04798 512 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 ACO1P21399 889 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 IVDP26440 423 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 BPIFB4P59827 614 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 NOMO3P69849 1222 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 IRX3P78415 501 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 PTK6Q13882 451 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 ZKSCAN8Q15776 578 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 FAM133BQ5BKY9 247 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 XRRA1Q6P2D8 792 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 ARMC9Q7Z3E5 817 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 ANKS4BQ8N8V4 417 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 ATL2Q8NHH9 583 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 GRK7Q8WTQ7 553 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 MRRFQ96E11 262 aaKnown RBP16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 AS3MTQ9HBK9 375 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 POTEJP0CG39 1038 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 MYBL1P10243 752 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 TNFSF9P41273 254 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 SLC1A1P43005 524 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 DRP2Q13474 957 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 IZUMO3Q5VZ72 239 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 SCARA5Q6ZMJ2 495 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 RHOT1Q8IXI2 618 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 TRIM11Q96F44 468 aa16.66■□□□□ 0.26
ARHGEF40-203ENST00000554514 TEX13BQ9BXU2 312 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms