RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GLT8D2Q9H1C3 349 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 WNT8AQ9H1J5 351 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 OSGEPQ9NPF4 335 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZBTB40Q9NUA8 1239 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MTMR4Q9NYA4 1195 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CDC23Q9UJX2 597 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 R3HCC1Q9Y3T6 440 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MTF2Q9Y483 593 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MTCH2Q9Y6C9 303 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SLC30A1Q9Y6M5 507 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 GSG1L2A8MUP6 293 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 F5H6K3 240 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CASQ2O14958 399 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZBTB39O15060 712 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SMAD7O15105 426 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MTSS1O43312 755 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 BRINP1O60477 761 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF254O75437 659 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 STAMBPO95630 424 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TTLL1O95922 423 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 EOMESO95936 686 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PGK1P00558 417 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CYP2D6P10635 497 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TMEM11P17152 192 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CNTFP26441 200 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TPP2P29144 1249 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 HOXC8P31273 242 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ATP5OP48047 213 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CLCN2P51788 898 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 IL1RL1Q01638 556 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 KLRC3Q07444 240 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ADCY1Q08828 1119 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 LRRC74AQ0VAA2 488 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SGCGQ13326 291 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 RCN1Q15293 331 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 OASLQ15646 514 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TBC1D25Q3MII6 688 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 LEXMQ3ZCV2 418 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 C2orf27AQ580R0 203 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SNRNP48Q6IEG0 339 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 LIN54Q6MZP7 749 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 KDELC1Q6UW63 502 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SYDE1Q6ZW31 735 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF365Q70YC5 407 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 EPHX4Q8IUS5 362 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ITPRIPQ8IWB1 547 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SIRT2Q8IXJ6 389 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 RBM12BQ8IXT5 1001 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 AFAP1L2Q8N4X5 818 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FNIP1Q8TF40 1166 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CHURC1Q8WUH1 139 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF606Q8WXB4 792 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FAM122AQ96E09 287 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 COG8Q96MW5 612 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SAMD11Q96NU1 681 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PLEKHG4BQ96PX9 1271 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 OSBPL10Q9BXB5 764 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 KLF16Q9BXK1 252 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 HOMER3Q9NSC5 361 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ABCF3Q9NUQ8 709 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZC3H7BQ9UGR2 993 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PPT2Q9UMR5 302 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SLC4A4Q9Y6R1 1079 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 LOXHD1Q8IVV2 1947 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PRR33A8MZF0 331 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PDPK1O15530 556 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 NMT2O60551 498 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 LPXNO60711 386 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PQBP1O60828 265 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ABLIM3O94929 683 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TBX18O95935 607 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ICAM1P05362 532 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SNHG28P0DPA3 235 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TOP1P11387 765 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SFTPCP11686 197 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ACTN1P12814 892 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CSF2RAP15509 400 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 GNA15P30679 374 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 HOXC12P31275 282 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ACTN2P35609 894 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SOX11P35716 441 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 EVCP57679 992 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ERVK-21P61565 698 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 KRT83P78385 493 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CD83Q01151 205 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PTSQ03393 145 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ADCY2Q08462 1091 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ITGA7Q13683 1181 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 PPP1R7Q15435 360 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 FSCN1Q16658 493 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 TSGA10IPQ3SY00 556 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 MTERF2Q49AM1 385 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 CAPRIN2Q6IMN6 1127 aaKnown RBP2.93□□□□□ -1.94
PRPF39-206ENST00000554429 RETSATQ6NUM9 610 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 GALNTL5Q7Z4T8 443 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 VSIG1Q86XK7 387 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 SLFN12Q8IYM2 578 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 ANKRD35Q8N283 1001 aa2.93□□□□□ -1.94
PRPF39-206ENST00000554429 VWA5B2Q8N398 1253 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms