RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 KREMEN2Q8NCW0 462 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 BEST2Q8NFU1 509 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 IKZF4Q9H2S9 585 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 EPHX3Q9H6B9 360 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 USP25Q9UHP3 1055 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 C2CD2Q9Y426 696 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 TSC2P49815 1807 aa14.18□□□□□ -0.14
SHMT2-211ENST00000554310 KIAA0391O15091 583 aaKnown RBP14.17□□□□□ -0.14
SHMT2-211ENST00000554310 ZMYND10O75800 440 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 IL18RAPO95256 599 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
SHMT2-211ENST00000554310 NFICP08651 508 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 SLFN14P0C7P3 912 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 PFKFB1P16118 471 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 PAX3P23760 479 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
SHMT2-211ENST00000554310 EHHADHQ08426 723 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 RAB33AQ14088 237 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 TMEM132DQ14C87 1099 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 VARS2Q5ST30 1063 aaKnown RBP14.17□□□□□ -0.14
SHMT2-211ENST00000554310 SPATA1Q5VX52 437 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 SLC8B1Q6J4K2 584 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 KANK3Q6NY19 840 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 NT5DC4Q86YG4 428 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 BRSK2Q8IWQ3 736 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 TDRD5Q8NAT2 981 aaKnown RBP14.17□□□□□ -0.14
SHMT2-211ENST00000554310 APPL2Q8NEU8 664 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 USTQ9Y2C2 406 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 CDY1Q9Y6F8 540 aa14.17□□□□□ -0.14
SHMT2-211ENST00000554310 FAM237AA0A1B0GTK4 181 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 CCDC195A0A1B0GUA6 201 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 PVALEFA0A1B0GWK0 134 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 H7C4K7 107 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 M0QZQ0 153 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 ACTN4O43707 911 aaKnown RBP14.16□□□□□ -0.14
SHMT2-211ENST00000554310 RFPL2O75678 378 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 PRPF6O94906 941 aaKnown RBP14.16□□□□□ -0.14
SHMT2-211ENST00000554310 MYL1P05976 194 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 HNRNPA1P09651 372 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHMT2-211ENST00000554310 SPATA31D3P0C874 917 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 HOXA9P31269 272 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 OR1D2P34982 312 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 ZNF280DQ6N043 979 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 CRELD2Q6UXH1 353 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-211ENST00000554310 SPATA31D4Q6ZUB0 917 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 EPM2AIP1Q7L775 607 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-211ENST00000554310 SMG7Q92540 1137 aaKnown RBP14.16□□□□□ -0.14
SHMT2-211ENST00000554310 HPS3Q969F9 1004 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 ZNF707Q96C28 371 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-211ENST00000554310 CHAMP1Q96JM3 812 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 CBWD1Q9BRT8 395 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 FAM213AQ9BRX8 229 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 BLZF1Q9H2G9 400 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 MUTYHQ9UIF7 546 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 HPSEQ9Y251 543 aa14.16□□□□□ -0.14
SHMT2-211ENST00000554310 CLUHO75153 1309 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 A0A1B0GVL5 298 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 A0A1W2PQ27 194 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 A0A1W2PQ64 194 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 A0A1W2PQD8 194 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 C2CD4DB7Z1M9 353 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 ADAM12O43184 909 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 EXTL3O43909 919 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 C8AP07357 584 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 POU2F2P09086 479 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 SP100P23497 879 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-211ENST00000554310 AFMP43652 599 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 GUCY2FP51841 1108 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 MRPL58Q14197 206 aaKnown RBP14.15□□□□□ -0.14
SHMT2-211ENST00000554310 TMEM31Q5JXX7 168 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 C9orf57Q5W0N0 161 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 ARMCX5Q6P1M9 558 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 RSPO2Q6UXX9 243 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-211ENST00000554310 RTL10Q7L3V2 364 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 OTOP3Q7RTS5 596 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 GLIS3Q8NEA6 775 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 SAAL1Q96ER3 474 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 PRKD2Q9BZL6 878 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 WDR6Q9NNW5 1121 aaKnown RBP14.15□□□□□ -0.14
SHMT2-211ENST00000554310 RBAKQ9NYW8 714 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-211ENST00000554310 SERTAD1Q9UHV2 236 aa14.15□□□□□ -0.14
SHMT2-211ENST00000554310 SCN1AP35498 2009 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 TBC1D4O60343 1298 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 GPR37L1O60883 481 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 SYKP43405 635 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 SNRPFP62306 86 aaKnown RBP14.14□□□□□ -0.15
SHMT2-211ENST00000554310 ROR1Q01973 937 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 CUL4BQ13620 913 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 PTPN21Q16825 1174 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 BMT2Q1RMZ1 405 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 CTXN3Q4LDR2 81 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 PPM1LQ5SGD2 360 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 EFCAB13Q8IY85 973 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 ZDHHC14Q8IZN3 488 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 PLCD3Q8N3E9 789 aa14.14□□□□□ -0.15
SHMT2-211ENST00000554310 FEZF2Q8TBJ5 459 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms