RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ZNF713Q8N859 430 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 IQUBQ8NA54 791 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 COLGALT1Q8NBJ5 622 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 BEST2Q8NFU1 509 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 BSNDQ8WZ55 320 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 MRPS27Q92552 414 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 IPO9Q96P70 1041 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CYP2S1Q96SQ9 504 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 RPP25Q9BUL9 199 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 GTPBP2Q9BX10 602 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 KRTAP4-8Q9BYQ9 185 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 UPF3AQ9H1J1 476 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TMX1Q9H3N1 280 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 HEBP1Q9NRV9 189 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 POLR3BQ9NW08 1133 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 RBAKQ9NYW8 714 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 KANSL3Q9P2N6 904 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TUBGCP4Q9UGJ1 667 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CFAP45Q9UL16 551 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TTLL3Q9Y4R7 772 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 ATP6V1DQ9Y5K8 247 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 POLEQ07864 2286 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 MYH7BA7E2Y1 1941 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SF3B1O75533 1304 aaKnown RBP eCLIP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TBC1D3BA6NDS4 549 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 FAM170BA6NMN3 283 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 BECN2A8MW95 431 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 H3BNC9 293 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 PIK3CDO00329 1044 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CAPN9O14815 690 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 DHX15O43143 795 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ADAM12O43184 909 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 NARSO43776 548 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 KIF4AO95239 1232 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CFIP05156 583 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM49P0CI25 452 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM49CP0CI26 452 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CYP11B2P19099 503 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 BDNFP23560 247 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CCNE1P24864 410 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CALRP27797 417 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 BMP8BP34820 402 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RFC2P35250 354 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GCLMP48507 274 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 DGKEP52429 567 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MYL7Q01449 175 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TWF1Q12792 350 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RAPGEF1Q13905 1077 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 HSP90AA2PQ14568 343 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TMEM132DQ14C87 1099 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TARBP2Q15633 366 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CCDC142Q17RM4 750 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RTP2Q5QGT7 225 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 FAM26FQ5R3K3 315 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GPR158Q5T848 1215 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 WSCD1Q658N2 575 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM68Q6AZZ1 485 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ANO7Q6IWH7 933 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RINT1Q6NUQ1 792 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 UBE2Q1Q7Z7E8 422 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CCDC117Q8IWD4 279 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RYBPQ8N488 228 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RNF214Q8ND24 703 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 PHOSPHO2Q8TCD6 241 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CPLX3Q8WVH0 158 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 RLN3Q8WXF3 142 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 KIFAP3Q92845 792 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 IGSF21Q96ID5 467 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ANKRD36BP1Q96IX9 119 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 HEXIM2Q96MH2 286 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 LPIN3Q9BQK8 851 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CBWD1Q9BRT8 395 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TPSD1Q9BZJ3 242 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TM6SF1Q9BZW5 370 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MTMR12Q9C0I1 747 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MIS12Q9H081 205 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 C2orf40Q9H1Z8 148 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 CXCL16Q9H2A7 254 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SMOC1Q9H4F8 434 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 METTL14Q9HCE5 456 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 NGRNQ9NPE2 291 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 C1orf112Q9NSG2 853 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GTSE1Q9NYZ3 720 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MOSPD1Q9UJG1 213 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 GMEB2Q9UKD1 530 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SYNPO2Q9UMS6 1093 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 COG5Q9UP83 839 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 FRMD4BQ9Y2L6 1034 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 LACTBL1A8MY62 500 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 C9IYK1 514 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 N4BP3O15049 544 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ASAP2O43150 1006 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 LAMTOR5O43504 91 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 HCRTO43612 131 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TSPAN1O60635 241 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 TBX10O75333 385 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 MAFO75444 373 aaPredicted RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 SLC34A2O95436 690 aa2.7□□□□□ -1.98
PRPF39-205ENST00000554081 ACO1P21399 889 aaKnown RBP2.7□□□□□ -1.98
PRPF39-205ENST00000554081 FSHRP23945 695 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms