RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 H0YCG3 227 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 GCNT3O95395 438 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 PAPLNO95428 1278 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 VNN2O95498 520 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 TXLNAP40222 546 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 MTMR3Q13615 1198 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 MRPL58Q14197 206 aaKnown RBP19.82■□□□□ 0.76
SHMT2-206ENST00000553529 ADALQ6DHV7 355 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 EFCAB13Q8IY85 973 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 GRAMD1CQ8IYS0 662 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 SUSD3Q96L08 255 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 PHOX2BQ99453 314 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 ZDHHC7Q9NXF8 308 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 DNMT3BQ9UBC3 853 aaKnown RBP19.82■□□□□ 0.76
SHMT2-206ENST00000553529 BACE2Q9Y5Z0 518 aa19.82■□□□□ 0.76
SHMT2-206ENST00000553529 FRMD3A2A2Y4 597 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 HSP90AA1P07900 732 aaKnown RBP19.81■□□□□ 0.76
SHMT2-206ENST00000553529 PLA2G5P39877 138 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 CREMQ03060 361 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 SLC5A9Q2M3M2 681 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 LIN9Q5TKA1 542 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 CCDC73Q6ZRK6 1079 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 OTOP3Q7RTS5 596 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 HDAC7Q8WUI4 952 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 CBWD1Q9BRT8 395 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 CRISPLD1Q9H336 500 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 ST6GALNAC4Q9H4F1 302 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 PCIF1Q9H4Z3 704 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 PANK4Q9NVE7 773 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 PCDHA7Q9UN72 937 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 MORC2Q9Y6X9 1032 aaPredicted RBP19.81■□□□□ 0.76
SHMT2-206ENST00000553529 SCN1AP35498 2009 aa19.81■□□□□ 0.76
SHMT2-206ENST00000553529 ADRB2P07550 413 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 LRPAP1P30533 357 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 RPL9P32969 192 aaKnown RBP19.8■□□□□ 0.76
SHMT2-206ENST00000553529 HOXD13P35453 343 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 CTXN3Q4LDR2 81 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 L1TD1Q5T7N2 865 aaKnown RBP19.8■□□□□ 0.76
SHMT2-206ENST00000553529 RNF19BQ6ZMZ0 732 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 ANKS3Q6ZW76 656 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 TTC9BQ8N6N2 239 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 ACSF2Q96CM8 615 aaPredicted RBP19.8■□□□□ 0.76
SHMT2-206ENST00000553529 ZNF396Q96N95 335 aaPredicted RBP19.8■□□□□ 0.76
SHMT2-206ENST00000553529 PGLYRP2Q96PD5 576 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 BLZF1Q9H2G9 400 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 PLEKHA5Q9HAU0 1116 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 KCNG1Q9UIX4 513 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 AGO2Q9UKV8 859 aaKnown RBP19.8■□□□□ 0.76
SHMT2-206ENST00000553529 UBQLN1Q9UMX0 589 aaKnown RBP19.8■□□□□ 0.76
SHMT2-206ENST00000553529 STYXL1Q9Y6J8 313 aa19.8■□□□□ 0.76
SHMT2-206ENST00000553529 TRAPPC3O43617 180 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 PPP6R2O75170 966 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 CFHP08603 1231 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 FSHRP23945 695 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 SPATA1Q5VX52 437 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 SLC8B1Q6J4K2 584 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 PARM1Q6UWI2 310 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 HS6ST3Q8IZP7 471 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 FBXL6Q8N531 539 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 NOC3LQ8WTT2 800 aaKnown RBP19.79■□□□□ 0.76
SHMT2-206ENST00000553529 POMGNT1Q8WZA1 660 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 FGF14Q92915 247 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 TCEAL4Q96EI5 215 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 FAM213AQ9BRX8 229 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 PCDHB8Q9UN66 801 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 NUMBLQ9Y6R0 609 aa19.79■□□□□ 0.76
SHMT2-206ENST00000553529 SYN3O14994 580 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 CUTAO60888 179 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 SOAT2O75908 522 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 ABLIM3O94929 683 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 YEATS4O95619 227 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 LAMP2P13473 410 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 AARSP49588 968 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHMT2-206ENST00000553529 TMEM132DQ14C87 1099 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 C9orf57Q5W0N0 161 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 LMBRD2Q68DH5 695 aaPredicted RBP19.78■□□□□ 0.76
SHMT2-206ENST00000553529 CWF19L1Q69YN2 538 aaKnown RBP19.78■□□□□ 0.76
SHMT2-206ENST00000553529 BMP8AQ7Z5Y6 402 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 PLCD3Q8N3E9 789 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 TMEM105Q8N8V8 129 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 FAM122AQ96E09 287 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 CYP4F11Q9HBI6 524 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 EPS15L1Q9UBC2 864 aa19.78■□□□□ 0.76
SHMT2-206ENST00000553529 M0QZQ0 153 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 PI15O43692 258 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 GJA1P17302 382 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 CCR2P41597 374 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 ADCY1Q08828 1119 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 TDGQ13569 410 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 HTR4Q13639 388 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 FGF13Q92913 245 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 RHOBTB2Q9BYZ6 727 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 TRIM9Q9C026 710 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 KBTBD4Q9NVX7 518 aa19.77■□□□□ 0.76
SHMT2-206ENST00000553529 PTPRJQ12913 1337 aa19.76■□□□□ 0.75
SHMT2-206ENST00000553529 PIRO00625 290 aa19.76■□□□□ 0.75
SHMT2-206ENST00000553529 POLR2DO15514 142 aaKnown RBP19.76■□□□□ 0.75
SHMT2-206ENST00000553529 NPR3P17342 541 aa19.76■□□□□ 0.75
SHMT2-206ENST00000553529 CEBPBP17676 345 aa19.76■□□□□ 0.75
SHMT2-206ENST00000553529 GAP43P17677 238 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms