RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 FGFR3P22607 806 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 BRCC3P46736 316 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 PRKCQQ04759 706 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 RAB33AQ14088 237 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 IQCEQ6IPM2 695 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 TPRG1Q6ZUI0 275 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 NPAS3Q8IXF0 933 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 SECISBP2LQ93073 1101 aaKnown RBP10.85□□□□□ -0.67
ACTN1-208ENST00000553370 MCRS1Q96EZ8 462 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 ZSCAN31Q96LW9 406 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-208ENST00000553370 ACAP3Q96P50 834 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 PPP1R10Q96QC0 940 aaKnown RBP10.85□□□□□ -0.67
ACTN1-208ENST00000553370 CORO1BQ9BR76 489 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 CDT1Q9H211 546 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 CXCL16Q9H2A7 254 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 CYP4F11Q9HBI6 524 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 SH2B1Q9NRF2 756 aaPredicted RBP10.85□□□□□ -0.67
ACTN1-208ENST00000553370 NCDNQ9UBB6 729 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 MRPS17Q9Y2R5 130 aaKnown RBP10.85□□□□□ -0.67
ACTN1-208ENST00000553370 SDK1Q7Z5N4 2213 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 COL4A3Q01955 1670 aa10.85□□□□□ -0.67
ACTN1-208ENST00000553370 SMIM28A0A1B0GU29 152 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 FAM170BA6NMN3 283 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 NCAM2O15394 837 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 EDN1P05305 212 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 RHOP08100 348 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 PTPN2P17706 415 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 MARCKSP29966 332 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-208ENST00000553370 GRM5P41594 1212 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 MAGEA9P43362 315 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 NPTX2P47972 431 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 SMTNP53814 917 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 ROR1Q01973 937 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 UPP1Q16831 310 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 CTXN3Q4LDR2 81 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 SLC44A4Q53GD3 710 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 VARS2Q5ST30 1063 aaKnown RBP10.84□□□□□ -0.67
ACTN1-208ENST00000553370 CYP4A22Q5TCH4 519 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 NT5DC1Q5TFE4 455 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 ZNF280DQ6N043 979 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 DTHD1Q6ZMT9 781 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 PDZD4Q76G19 769 aaPredicted RBP10.84□□□□□ -0.67
ACTN1-208ENST00000553370 RTL10Q7L3V2 364 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 ERMP1Q7Z2K6 904 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 FBXO18Q8NFZ0 1043 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 ATRIPQ8WXE1 791 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 RPP25Q9BUL9 199 aaKnown RBP10.84□□□□□ -0.67
ACTN1-208ENST00000553370 BRD9Q9H8M2 597 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 GDE1Q9NZC3 331 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 BACE2Q9Y5Z0 518 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 DCHS1Q96JQ0 3298 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 CACNA1BQ00975 2339 aa10.84□□□□□ -0.67
ACTN1-208ENST00000553370 NCOR2Q9Y618 2525 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 E9PMD0 336 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 LAD1O00515 517 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 ZNF197O14709 1029 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 SLC16A4O15374 487 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 LRRN2O75325 713 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 PAPLNO95428 1278 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 POU2F2P09086 479 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 MCF2P10911 925 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 HOXB3P14651 431 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-208ENST00000553370 CEBPBP17676 345 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 STARD6P59095 220 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 CSTF1Q05048 431 aaKnown RBP10.83□□□□□ -0.68
ACTN1-208ENST00000553370 RAD51AP2Q09MP3 1159 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 NOLC1Q14978 699 aaKnown RBP eCLIP10.83□□□□□ -0.68
ACTN1-208ENST00000553370 NAB2Q15742 525 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 ZBTB41Q5SVQ8 909 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 MPZL3Q6UWV2 235 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 ZNF852Q6ZMS4 543 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 NUDT18Q6ZVK8 323 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 CEP120Q8N960 986 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 APPL2Q8NEU8 664 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 RASSF8Q8NHQ8 419 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 RUBCNQ92622 972 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 ACO2Q99798 780 aaKnown RBP10.83□□□□□ -0.68
ACTN1-208ENST00000553370 TARS2Q9BW92 718 aaKnown RBP10.83□□□□□ -0.68
ACTN1-208ENST00000553370 PRM3Q9NNZ6 103 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 DNMT3BQ9UBC3 853 aaKnown RBP10.83□□□□□ -0.68
ACTN1-208ENST00000553370 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 RBM19Q9Y4C8 960 aaKnown RBP10.83□□□□□ -0.68
ACTN1-208ENST00000553370 SCN1AP35498 2009 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 DENND4CQ5VZ89 1909 aa10.83□□□□□ -0.68
ACTN1-208ENST00000553370 TSC2P49815 1807 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 H3BQV1 296 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 SYN3O14994 580 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 ECI2O75521 394 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 MYL4P12829 197 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 CD72P21854 359 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 RPL9P32969 192 aaKnown RBP10.82□□□□□ -0.68
ACTN1-208ENST00000553370 SOX4Q06945 474 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-208ENST00000553370 ST3GAL1Q11201 340 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 GRM2Q14416 872 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 PDIA5Q14554 519 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 PPP2R5DQ14738 602 aa10.82□□□□□ -0.68
ACTN1-208ENST00000553370 ECM1Q16610 540 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms