RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 FOXJ1Q92949 421 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 MYO19Q96H55 970 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 LZTS2Q9BRK4 669 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 TTPALQ9BTX7 342 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 CNNM2Q9H8M5 875 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 LY9Q9HBG7 655 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 TBC1D22BQ9NU19 505 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 VTI1BQ9UEU0 232 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 EBF1Q9UH73 591 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ADAM28Q9UKQ2 775 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 PCDHA6Q9UN73 950 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 APOBEC2Q9Y235 224 aaKnown RBP5.78□□□□□ -1.48
CKAP4-203ENST00000553039 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.78□□□□□ -1.48
CKAP4-203ENST00000553039 PCDHA8Q9Y5H6 950 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 PCDHA10Q9Y5I2 948 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 KIAA1671Q9BY89 1806 aa5.78□□□□□ -1.48
CKAP4-203ENST00000553039 ZMYM6O95789 1325 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 CCDC194A0A1B0GVG4 234 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 ERICH2A1L162 156 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 SPECC1L-ADORA2AF8WAN1 911 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 MEIS1O00470 390 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 FOXP2O15409 715 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 OPHN1O60890 802 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 CSDE1O75534 798 aaKnown RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 C1QL1O75973 258 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 WISP1O95388 367 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 ADH1BP00325 375 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 FOSP01100 380 aaPredicted RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 LRG1P02750 347 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 RLBP1P12271 317 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 ATP4AP20648 1035 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 GFPT1Q06210 699 aaPredicted RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 SRSF1Q07955 248 aaKnown RBP eCLIP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 SLC14A1Q13336 389 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 TRIM61Q5EBN2 209 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 COX20Q5RI15 118 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 CEP57Q86XR8 500 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 SMAP1Q8IYB5 467 aaPredicted RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 ELMOD1Q8N336 334 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 LEMD2Q8NC56 503 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 CEP76Q8TAP6 659 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 MDM1Q8TC05 714 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 PIGKQ92643 395 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 EVI5LQ96CN4 794 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 ZNF668Q96K58 619 aaPredicted RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 ZNF512Q96ME7 567 aaPredicted RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 TMEM209Q96SK2 561 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 CLSTN3Q9BQT9 956 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 C2orf49Q9BVC5 232 aaPredicted RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 GPR62Q9BZJ7 368 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 TSPAN10Q9H1Z9 355 aaPredicted RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 ACBD3Q9H3P7 528 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 TRPV4Q9HBA0 871 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 CAPN10Q9HC96 672 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 AGO4Q9HCK5 861 aaKnown RBP5.77□□□□□ -1.49
CKAP4-203ENST00000553039 HCFC1R1Q9NWW0 138 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 MARCH5Q9NX47 278 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 TPCN1Q9ULQ1 816 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 DDX19BQ9UMR2 479 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 MAP4K5Q9Y4K4 846 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 DOCK8Q8NF50 2099 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 SPEGQ15772 3267 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 HECTD1Q9ULT8 2610 aa5.77□□□□□ -1.49
CKAP4-203ENST00000553039 SF3B1O75533 1304 aaKnown RBP eCLIP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 TEX51A0A1B0GUA7 166 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 A0A1W2PRU2 124 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 FAM205CA6NFA0 338 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 ARL5CA6NH57 179 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 MEIS3P2A8K0S8 358 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 HEPACAM2A8MVW5 462 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 B4E1Z4 1266 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 IPO5O00410 1097 aaKnown RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 RRP8O43159 456 aaKnown RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 B4GALT3O60512 393 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 APBB3O95704 486 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 OR1D2P34982 312 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 SCTRP47872 440 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 DHPSP49366 369 aaPredicted RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 GNAQP50148 359 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 CYP4F3Q08477 520 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 DSC1Q08554 894 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 TRDNQ13061 729 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 BYSLQ13895 437 aaKnown RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 CCINQ13939 588 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 GRM4Q14833 912 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 AGERQ15109 404 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 PON2Q15165 354 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 PCBP1Q15365 356 aaKnown RBP eCLIP5.76□□□□□ -1.491e-8■■■□□ 17.4
CKAP4-203ENST00000553039 PSMD5Q16401 504 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 FBXO43Q4G163 708 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 ARHGAP29Q52LW3 1261 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 SPDYCQ5MJ68 293 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 FAM171A1Q5VUB5 890 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 ZNF746Q6NUN9 644 aaPredicted RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 ADGRD1Q6QNK2 874 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 PRSS55Q6UWB4 352 aaPredicted RBP5.76□□□□□ -1.49
CKAP4-203ENST00000553039 VITQ6UXI7 678 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 Q6ZS52 159 aa5.76□□□□□ -1.49
CKAP4-203ENST00000553039 PDZD4Q76G19 769 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms