RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	KBTBD13	C9JR72	458 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	RECQL4	O94761	1208 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	STAU1	O95793	577 aa	Known RBP	13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	ITGB3	P05106	788 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	KRT19	P08727	400 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	THPO	P40225	353 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	YWHAE	P62258	255 aa	Known RBP	13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	FMO1	Q01740	532 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	CDR2	Q01850	454 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	TRIM71	Q2Q1W2	868 aa	Known RBP	13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	FAM26D	Q5JW98	314 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	ALKAL1	Q6UXT8	129 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	ZNF677	Q86XU0	584 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	MYRIP	Q8NFW9	859 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	TRIM58	Q8NG06	486 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	NOX5	Q96PH1	765 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	ALS2CR12	Q96Q35	445 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	VRTN	Q9H8Y1	702 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	L2HGDH	Q9H9P8	463 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	SEPT11	Q9NVA2	429 aa	Known RBP	13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	DPP3	Q9NY33	737 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	NOD1	Q9Y239	953 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	PTPN22	Q9Y2R2	807 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	PCDHB2	Q9Y5E7	798 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480	NCAN	O14594	1321 aa		13.61	□□□□□ -0.23
CACNB3-223	ENST00000552480		A0A0A6YYK5	440 aa	Predicted RBP	13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	ANO9	A1A5B4	782 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	GPR182	O15218	404 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	URI1	O94763	535 aa	Predicted RBP	13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	MOCS3	O95396	460 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	TMEM253	P0C7T8	217 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	ASPA	P45381	313 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	ZNF132	P52740	706 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	RBP5	P82980	135 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	TUBB2A	Q13885	445 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	ZNF667	Q5HYK9	610 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	TAF3	Q5VWG9	929 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	TWF2	Q6IBS0	349 aa	Known RBP	13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	SMG8	Q8ND04	991 aa	Known RBP	13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	BEST2	Q8NFU1	509 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	SH3TC2	Q8TF17	1288 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	DDX1	Q92499	740 aa	Known RBP	13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	TUBB2B	Q9BVA1	445 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	SEZ6L	Q9BYH1	1024 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	ISCU	Q9H1K1	167 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	STARD7	Q9NQZ5	370 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	TRMT13	Q9NUP7	481 aa	Known RBP	13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	ST3GAL5	Q9UNP4	418 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	HES2	Q9Y543	173 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	IPP	Q9Y573	584 aa		13.6	□□□□□ -0.23
CACNB3-223	ENST00000552480	ANKRD62	A6NC57	917 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	RTN2	O75298	545 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	MME	P08473	750 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	GZMA	P12544	262 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	P4HA1	P13674	534 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	POLR2B	P30876	1174 aa	Known RBP	13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	GALC	P54803	685 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	ZBTB6	Q15916	424 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	IFI16	Q16666	785 aa	Known RBP	13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	XKR4	Q5GH76	650 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	FBXO47	Q5MNV8	452 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	TMEM270	Q6UE05	265 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	PALB2	Q86YC2	1186 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	ZMAT2	Q96NC0	199 aa	Known RBP	13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	PCDHB18P	Q96TA0	734 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	APOL6	Q9BWW8	343 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	BCO2	Q9BYV7	579 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	UNC93B1	Q9H1C4	597 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	ERVK-5	Q9HDB9	667 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	ACP6	Q9NPH0	428 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	CISH	Q9NSE2	258 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	WBP1L	Q9NX94	342 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	PARP2	Q9UGN5	583 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	SALL4	Q9UJQ4	1053 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	UBQLN1	Q9UMX0	589 aa	Known RBP	13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	AGAP1	Q9UPQ3	857 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	SQOR	Q9Y6N5	450 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	CAPN6	Q9Y6Q1	641 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	CIT	O14578	2027 aa		13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	PDCD11	Q14690	1871 aa	Known RBP	13.59	□□□□□ -0.23
CACNB3-223	ENST00000552480	TMCO5B	A8MYB1	307 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	DNM1L	O00429	736 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	XPOT	O43592	962 aa	Known RBP	13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	BUB1	O43683	1085 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	KCNE1	P15382	129 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	AKAP5	P24588	427 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	GNA15	P30679	374 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	GUCY2F	P51841	1108 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	PAK2	Q13177	524 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	CLEC16A	Q2KHT3	1053 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	SCARA5	Q6ZMJ2	495 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	HACE1	Q8IYU2	909 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	USP38	Q8NB14	1042 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	HPDL	Q96IR7	371 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	CYP3A43	Q9HB55	503 aa		13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	PAK6	Q9NQU5	681 aa	Predicted RBP	13.58	□□□□□ -0.24
CACNB3-223	ENST00000552480	TAS2R14	Q9NYV8	317 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms