RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 GAS6Q14393 721 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 CTXN3Q4LDR2 81 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 CYP4A22Q5TCH4 519 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 TPGS2Q68CL5 300 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 APBB1IPQ7Z5R6 666 aaPredicted RBP23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 DAW1Q8N136 415 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 CELF5Q8N6W0 485 aaKnown RBP23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 C4orf32Q8N8J7 132 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 ZNF512Q96ME7 567 aaPredicted RBP23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 TMEM134Q9H6X4 195 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 KIAA1024Q9UPX6 916 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 PIAS3Q9Y6X2 628 aa23.72■■□□□ 1.39
SMARCD1-212ENST00000551966 CCDC169A6NNP5 214 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 PROZP22891 400 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 RPL9P32969 192 aaKnown RBP23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 EPHA5P54756 1037 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 PEX3P56589 373 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 TWF1Q12792 350 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 ZNF568Q3ZCX4 644 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 TMEM130Q8N3G9 435 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 SUSD3Q96L08 255 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 ACAP3Q96P50 834 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 TRPV4Q9HBA0 871 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 NUB1Q9Y5A7 615 aa23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.71■■□□□ 1.39
SMARCD1-212ENST00000551966 ARNTLO00327 626 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 MYL4P12829 197 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 CCNE1P24864 410 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 SATB1Q01826 763 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 RNF19BQ6ZMZ0 732 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 MFSD6LQ8IWD5 586 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 ZSCAN18Q8TBC5 510 aaPredicted RBP23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 DDX12PQ92771 950 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 RSPRY1Q96DX4 576 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 ZBTB45Q96K62 511 aaPredicted RBP23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 IER2Q9BTL4 223 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 CNTN3Q9P232 1028 aa23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 AFF4Q9UHB7 1163 aaKnown RBP23.7■■□□□ 1.38
SMARCD1-212ENST00000551966 F5P12259 2224 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 TICRRQ7Z2Z1 1910 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 PHLPP2Q6ZVD8 1323 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 HRO43593 1189 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 CXCL12P48061 93 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 CCR3P51677 355 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 DMWDQ09019 674 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 TEAD2Q15562 447 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 HAUS3Q68CZ6 603 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 LAIR1Q6GTX8 287 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 IQCEQ6IPM2 695 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 TBC1D32Q96NH3 1257 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 LRRC3Q9BY71 257 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 MRPL4Q9BYD3 311 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 DDX19AQ9NUU7 478 aaKnown RBP23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 ARHGAP28Q9P2N2 729 aa23.69■■□□□ 1.38
SMARCD1-212ENST00000551966 E9PMD0 336 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 ZNF263O14978 683 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 VNN2O95498 520 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 MCF2P10911 925 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 FXR2P51116 673 aaKnown RBP eCLIP23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 ORC2Q13416 577 aaPredicted RBP23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 SLC10A6Q3KNW5 377 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 WDR44Q5JSH3 913 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 ELMOD1Q8N336 334 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 SHKBP1Q8TBC3 707 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 DEPDC1BQ8WUY9 529 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 TCHPQ9BT92 498 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 LRWD1Q9UFC0 647 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 RAB23Q9ULC3 237 aa23.68■■□□□ 1.38
SMARCD1-212ENST00000551966 HEPACAM2A8MVW5 462 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 HIP1RO75146 1068 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 RETP07949 1114 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 ADRB1P08588 477 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 MCM4P33991 863 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 MAPK7Q13164 816 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 PPP2R5DQ14738 602 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 SAFBQ15424 915 aaKnown RBP eCLIP23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 SEZ6Q53EL9 994 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 ZNF280DQ6N043 979 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 PRR23BQ6ZRT6 265 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 GPIHBP1Q8IV16 184 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 RBM12Q9NTZ6 932 aaKnown RBP23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 MAFFQ9ULX9 164 aa23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 KMT2BQ9UMN6 2715 aaPredicted RBP23.67■■□□□ 1.38
SMARCD1-212ENST00000551966 CHURC1-FNTBB4DL54 471 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 FNTBP49356 437 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 MLLT6P55198 1093 aaPredicted RBP23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 SRSF5Q13243 272 aaKnown RBP23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 PTGDRQ13258 359 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 PDIA5Q14554 519 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 NBR1Q14596 966 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 TTC38Q5R3I4 469 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 MPZL3Q6UWV2 235 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 APPL2Q8NEU8 664 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 BEST2Q8NFU1 509 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 FOXP1Q9H334 677 aaPredicted RBP23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 CRISPLD1Q9H336 500 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 KMT5AQ9NQR1 393 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 ASAH2Q9NR71 780 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 PCDHB8Q9UN66 801 aa23.66■■□□□ 1.38
SMARCD1-212ENST00000551966 SPTBN2O15020 2390 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms