RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 BRCC3P46736 316 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 FAM160A1Q05DH4 1040 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 ITIH3Q06033 890 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 PRSS55Q6UWB4 352 aaPredicted RBP16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 ANKS3Q6ZW76 656 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 CEP57Q86XR8 500 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 C12orf56Q8IXR9 622 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 FMR1NBQ8N0W7 255 aaPredicted RBP16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 KIAA0895Q8NCT3 520 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 GOLGA5Q8TBA6 731 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 HDAC7Q8WUI4 952 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 SUSD6Q92537 303 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 SUSD3Q96L08 255 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 S1PR5Q9H228 398 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 SFXN1Q9H9B4 322 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 KIAA1586Q9HCI6 787 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 RBAKQ9NYW8 714 aaPredicted RBP16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 MTRRQ9UBK8 725 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 BACE2Q9Y5Z0 518 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 TGFB1I1O43294 461 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 RHOBTB3O94955 611 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 MCM4P33991 863 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 PLA2G5P39877 138 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 AARSP49588 968 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 STK4Q13043 487 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 KNOP1Q1ED39 458 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 ADHFE1Q8IWW8 467 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 NELFCDQ8IXH7 590 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 ENGASEQ8NFI3 743 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 ADAM7Q9H2U9 754 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 HSPBP1Q9NZL4 362 aa16.71■□□□□ 0.27
PRPF40B-211ENST00000551063 TCHHQ07283 1943 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 GOLGA8IPA6NC78 632 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 GOLGA8JA6NMD2 632 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 I3L4J1 428 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 KIF20AO95235 890 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 GUCY2FP51841 1108 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 ZP2Q05996 745 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 SNW1Q13573 536 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 KCNB1Q14721 858 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 SURF1Q15526 300 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 CES5AQ6NT32 575 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 EFCAB13Q8IY85 973 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 ZSWIM2Q8NEG5 633 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 APPL2Q8NEU8 664 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 CMASQ8NFW8 434 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 TIGD1Q96MW7 591 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 NECTIN4Q96NY8 510 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 POP1Q99575 1024 aaKnown RBP16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 CLSTN3Q9BQT9 956 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 PLEKHA4Q9H4M7 779 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 C11orf16Q9NQ32 467 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 MAN1C1Q9NR34 630 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
PRPF40B-211ENST00000551063 ANO9A1A5B4 782 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 FAM86C2PA6NEL3 165 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 C19orf67A6NJJ6 358 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 ZNF233A6NK53 670 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 SPDYE4A6NLX3 237 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 PRR33A8MZF0 331 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 H7C4K7 107 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 M0QZQ0 153 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 PIRO00625 290 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 TGM5O43548 720 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 DCXO43602 365 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 RPL17P18621 184 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 CBX2Q14781 532 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 VARS2Q5ST30 1063 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 C9orf57Q5W0N0 161 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 LILRA6Q6PI73 481 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 RHOBTB2Q9BYZ6 727 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 FBXW11Q9UKB1 542 aa16.69■□□□□ 0.26
PRPF40B-211ENST00000551063 TRIP11Q15643 1979 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 ARHGEF37A1IGU5 675 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 PAPLNO95428 1278 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 MTHFRP42898 656 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 WNT7BP56706 349 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 RAB33AQ14088 237 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 MRPL58Q14197 206 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 RARS2Q5T160 578 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 SLC8B1Q6J4K2 584 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 ZNF280DQ6N043 979 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 CYP26C1Q6V0L0 522 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 CBWD2Q8IUF1 395 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 XXYLT1Q8NBI6 393 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 CACTINQ8WUQ7 758 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 RIPOR3Q96MK2 946 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 PHF7Q9BWX1 381 aaPredicted RBP16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 DPP3Q9NY33 737 aa16.68■□□□□ 0.26
PRPF40B-211ENST00000551063 PDCD11Q14690 1871 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 PDXKO00764 312 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 PPEF2O14830 753 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 CLIC2O15247 247 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 TYMPP19971 482 aa16.67■□□□□ 0.26
PRPF40B-211ENST00000551063 CYP2J2P51589 502 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms