RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 MAGEC2Q9UBF1 373 aaPredicted RBP14.58□□□□□ -0.08
ERBB3-215ENST00000550828 PCDHA11Q9Y5I1 949 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 UNC80Q8N2C7 3258 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 TMEM265A0A087WTH1 108 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 LRRC10BA6NIK2 292 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 NT5C1B-RDH14C9J2C7 533 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 PIRO00625 290 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 SPTLC1O15269 473 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 KIF4AO95239 1232 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 HLA-DRAP01903 254 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 TNNC2P02585 160 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 AFPP02771 609 aaKnown RBP14.57□□□□□ -0.08
ERBB3-215ENST00000550828 CA3P07451 260 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 GTF2H1P32780 548 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 MXI1P50539 228 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 MYL7Q01449 175 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 RNASELQ05823 741 aaKnown RBP14.57□□□□□ -0.08
ERBB3-215ENST00000550828 UPP1Q16831 310 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 VWA3BQ502W6 1294 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 EPC2Q52LR7 807 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 DPY19L2P1Q6NXN4 242 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 COLGALT1Q8NBJ5 622 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 LMO3Q8TAP4 145 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 RSPH1Q8WYR4 309 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 NAP1L5Q96NT1 182 aaPredicted RBP14.57□□□□□ -0.08
ERBB3-215ENST00000550828 VN1R3Q9BXE9 311 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 XYLT2Q9H1B5 865 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 NKX2-4Q9H2Z4 354 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.57□□□□□ -0.08
ERBB3-215ENST00000550828 SLC38A7Q9NVC3 462 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 ITGA11Q9UKX5 1188 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 PRG3Q9Y2Y8 225 aaPredicted RBP14.57□□□□□ -0.08
ERBB3-215ENST00000550828 COQ4Q9Y3A0 265 aa14.57□□□□□ -0.08
ERBB3-215ENST00000550828 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.56□□□□□ -0.08
ERBB3-215ENST00000550828 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.56□□□□□ -0.08
ERBB3-215ENST00000550828 LGALS16A8MUM7 142 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 GOLGA6L19H0YKK7 550 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 PODXLO00592 558 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 NRP1O14786 923 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 EFEMP2O95967 443 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 PRKCSHP14314 528 aaPredicted RBP14.56□□□□□ -0.08
ERBB3-215ENST00000550828 FOSL2P15408 326 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 OR1G1P47890 313 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 MYL6P60660 151 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 FANCCQ00597 558 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 TAP1Q03518 808 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 PTPN21Q16825 1174 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 FIBCD1Q8N539 461 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 HASPINQ8TF76 798 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 CACTINQ8WUQ7 758 aaKnown RBP14.56□□□□□ -0.08
ERBB3-215ENST00000550828 TMEM175Q9BSA9 504 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 C17orf80Q9BSJ5 609 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 ANP32EQ9BTT0 268 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 PI4K2AQ9BTU6 479 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 NDST4Q9H3R1 872 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 APOBEC3GQ9HC16 384 aaKnown RBP14.56□□□□□ -0.08
ERBB3-215ENST00000550828 AGAP1Q9UPQ3 857 aa14.56□□□□□ -0.08
ERBB3-215ENST00000550828 CDH23Q9H251 3354 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 TMEM189-UBE2V1I3L0A0 370 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 PMM2O15305 246 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 TEX33O43247 280 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 XPOTO43592 962 aaKnown RBP14.55□□□□□ -0.08
ERBB3-215ENST00000550828 BRCC3P46736 316 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 AARSP49588 968 aaKnown RBP eCLIP14.55□□□□□ -0.08
ERBB3-215ENST00000550828 AP3M2P53677 418 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 APBA1Q02410 837 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 KCNMA1Q12791 1236 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 BIRC3Q13489 604 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 NCOA4Q13772 614 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 KRT39Q6A163 491 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 SPOPLQ6IQ16 392 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 KCNT2Q6UVM3 1135 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 SLC39A11Q8N1S5 342 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 FAM193BQ96PV7 902 aaPredicted RBP14.55□□□□□ -0.08
ERBB3-215ENST00000550828 CRACR2AQ9BSW2 395 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 RTN4Q9NQC3 1192 aaKnown RBP14.55□□□□□ -0.08
ERBB3-215ENST00000550828 TRANK1O15050 2925 aa14.55□□□□□ -0.08
ERBB3-215ENST00000550828 A0A1B0GTH6 734 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 I3L4J1 428 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 ASS1P00966 412 aaKnown RBP14.54□□□□□ -0.08
ERBB3-215ENST00000550828 KRT19P08727 400 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 LAG3P18627 525 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 CDK11BP21127 795 aaKnown RBP14.54□□□□□ -0.08
ERBB3-215ENST00000550828 DNAJB2P25686 324 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 RPL9P32969 192 aaKnown RBP14.54□□□□□ -0.08
ERBB3-215ENST00000550828 PIK3CAP42336 1068 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 KLK7P49862 253 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 USP37Q86T82 979 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 MYLIPQ8WY64 445 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 DDX27Q96GQ7 796 aaKnown RBP14.54□□□□□ -0.08
ERBB3-215ENST00000550828 UROC1Q96N76 676 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 ZNF558Q96NG5 402 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 SIX2Q9NPC8 291 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 AJAP1Q9UKB5 411 aaPredicted RBP14.54□□□□□ -0.08
ERBB3-215ENST00000550828 POLIQ9UNA4 740 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 FAN1Q9Y2M0 1017 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 PLXNA3P51805 1871 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 PTPRDP23468 1912 aa14.54□□□□□ -0.08
ERBB3-215ENST00000550828 FSD2A1L4K1 749 aa14.53□□□□□ -0.08
ERBB3-215ENST00000550828 EPOPA6NHQ4 379 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms