RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 TMEM8AQ9HCN3 771 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SIX2Q9NPC8 291 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 ST7Q9NRC1 585 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 HOMER2Q9NSB8 354 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 FBXO28Q9NVF7 368 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 MARK1Q9P0L2 795 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 CTTNBP2NLQ9P2B4 639 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 UVRAGQ9P2Y5 699 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 FBXO40Q9UH90 709 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 TMEM59LQ9UK28 342 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 TBX20Q9UMR3 447 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 USP20Q9Y2K6 914 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 PPME1Q9Y570 386 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 GJA3Q9Y6H8 435 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 IGSF9BQ9UPX0 1349 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 RGPD3A6NKT7 1758 aaPredicted RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 RGPD4Q7Z3J3 1758 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 ZNF233A6NK53 670 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 H3BQF6 201 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 DDX3XO00571 662 aaKnown RBP eCLIP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 HNRNPDLO14979 420 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 NCK2O43639 380 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 SYF2O95926 243 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 TFRCP02786 760 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 MYBL1P10243 752 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 ABCB4P21439 1286 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 MAN1A1P33908 653 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 SCNN1AP37088 669 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 USP8P40818 1118 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 AP3M2P53677 418 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 SLC7A5Q01650 507 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 GCNT1Q02742 428 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 SPP2Q13103 211 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 BIRC3Q13489 604 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 PRPF4BQ13523 1007 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 PLS1Q14651 629 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 STXBP2Q15833 593 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CBWD6Q4V339 395 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CBWD3Q5JTY5 395 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 COX20Q5RI15 118 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CBWD5Q5RIA9 395 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 C11orf63Q6NUN7 778 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 LRIG3Q6UXM1 1119 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 MICALCLQ6ZW33 695 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 ARMC9Q7Z3E5 817 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 BTLAQ7Z6A9 289 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 NT5DC3Q86UY8 548 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CD302Q8IX05 232 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 EFCAB13Q8IY85 973 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 GPD1LQ8N335 351 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 PPM1KQ8N3J5 372 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CHST13Q8NET6 341 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 SLC7A3Q8WY07 619 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 POMGNT1Q8WZA1 660 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CLP1Q92989 425 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 BICD1Q96G01 975 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 MYO19Q96H55 970 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 C12orf42Q96LP6 360 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 INPP4AQ96PE3 977 aaPredicted RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 TAAR1Q96RJ0 339 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CAPS2Q9BXY5 557 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 PACSIN1Q9BY11 444 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 IMPG2Q9BZV3 1241 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 STMN4Q9H169 189 aaPredicted RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 ATP6V0A4Q9HBG4 840 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 JPH1Q9HDC5 661 aaPredicted RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 HOMER3Q9NSC5 361 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 NRBP2Q9NSY0 501 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 RNF146Q9NTX7 359 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CXXC1Q9P0U4 656 aaPredicted RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 MTRF1LQ9UGC7 380 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CNOT7Q9UIV1 285 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 NFU1Q9UMS0 254 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 NOC2LQ9Y3T9 749 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 ZMYM2Q9UBW7 1377 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 NCANO14594 1321 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 MYH7BA7E2Y1 1941 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 DENND3A2RUS2 1198 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 FOXN3O00409 490 aaPredicted RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 EBAG9O00559 213 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 NDC80O14777 642 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 ZBTB39O15060 712 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 PPFIA4O75335 1185 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 FGGP02679 453 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 FTLP02792 175 aaPredicted RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 ARAFP10398 606 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 KCNA3P22001 575 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CHRNA3P32297 505 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 CTNNA1P35221 906 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 SLC1A1P43005 524 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 GCLMP48507 274 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 LIG4P49917 911 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 GPC3P51654 580 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 DRG2P55039 364 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 HNRNPH2P55795 449 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 PCBP4P57723 403 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 MRPS9P82933 396 aaKnown RBP4.67□□□□□ -1.66
CCDC59-204ENST00000550589 ODF2Q5BJF6 829 aa4.67□□□□□ -1.66
CCDC59-204ENST00000550589 DNAJC21Q5F1R6 531 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms