RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 CACNB2Q08289 660 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 CUL3Q13618 768 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 IER5Q5VY09 327 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 SPATA4Q8NEY3 305 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 UVRAGQ9P2Y5 699 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 LTN1O94822 1766 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 GOLGA8TH3BQL2 631 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 SGSM1Q2NKQ1 1148 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 ZNF668Q96K58 619 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 CDYLQ9Y232 598 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 MYO18AQ92614 2054 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 SLC18A3Q16572 532 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 PHF21AQ96BD5 680 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 PGM1P36871 562 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 TWF1Q12792 350 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 ANKMY2Q8IV38 441 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 TEX13BQ9BXU2 312 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 AMACRQ9UHK6 382 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 CYP19A1P11511 503 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 PPP3CCP48454 512 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 RAD23BP54727 409 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 MRPL28Q13084 256 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 BRINP3Q76B58 766 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 ENO1P06733 434 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 GTF3C2Q8WUA4 911 aaPredicted RBP13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 APOA1P02647 267 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 NUP93Q8N1F7 819 aa13.12□□□□□ -0.31
RAB3IP-212ENST00000550536 GSNP06396 782 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 HIST1H2AGP0C0S8 130 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 HIST1H2ADP20671 130 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 SNAPC2Q13487 334 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 COG2Q14746 738 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 KCNV2Q8TDN2 545 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 ELMO2Q96JJ3 720 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 HIST1H2AHQ96KK5 128 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 HIST1H2AJQ99878 128 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 H2AFJQ9BTM1 129 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 CATSPERBQ9H7T0 1116 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 TMEM161AQ9NX61 479 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 SLC30A5Q8TAD4 765 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 MS4A14Q96JA4 679 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 KDSRQ06136 332 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 DYNC1I2Q13409 638 aaKnown RBP13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 LRRC14Q15048 493 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 GOLGA8RI6L899 631 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 MAGEB2O15479 319 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 C7orf25Q9BPX7 421 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 SUPT3HB4E1H0 165 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 GUCY1A3Q02108 690 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 TTC39BQ5VTQ0 682 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 SHC4Q6S5L8 630 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 TRIM9Q9C026 710 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 POLD4Q9HCU8 107 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 CMTM5Q96DZ9 223 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 SERPIND1P05546 499 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 ARHGEF7Q14155 803 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 PITPNM2Q9BZ72 1349 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 FOXO4P98177 505 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 SV2CQ496J9 727 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 CENPPQ6IPU0 288 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 CYGBQ8WWM9 190 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 SNX12Q9UMY4 172 aa13.11□□□□□ -0.31
RAB3IP-212ENST00000550536 EIF3DO15371 548 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 SESN2P58004 480 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 DEPDC1Q5TB30 811 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 PRUNE1Q86TP1 453 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 ARHGAP18Q8N392 663 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 ZNF280CQ8ND82 737 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 CALML6Q8TD86 181 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 OSBPL1AQ9BXW6 950 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 ITIH6Q6UXX5 1313 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 RASSF10A6NK89 507 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 EEF2KO00418 725 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 SNRPFP62306 86 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 ZNF200P98182 395 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 LATS2Q9NRM7 1088 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 ACADSBP45954 432 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 TRAPPC11Q7Z392 1133 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 PCYOX1LQ8NBM8 494 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 RBM15Q96T37 977 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 REEP2Q9BRK0 252 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 FAM129AQ9BZQ8 928 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 ARL2BPQ9Y2Y0 163 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 PKP3Q9Y446 797 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 MYO1CO00159 1063 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 AGTP01019 485 aa13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 ZNF512Q96ME7 567 aaPredicted RBP13.1□□□□□ -0.31
RAB3IP-212ENST00000550536 CCSER1Q9C0I3 900 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms