RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PSMC3P17980 439 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 LIG1P18858 919 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 CCR2P41597 374 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 YARSP54577 528 aaKnown RBP10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 EPHA5P54756 1037 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 PDIA5Q14554 519 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 ECM1Q16610 540 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 LEMD2Q8NC56 503 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 FAM3CQ92520 227 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 SMARCD2Q92925 531 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 TCEAL4Q96EI5 215 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 SUSD3Q96L08 255 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 ZNF512Q96ME7 567 aaPredicted RBP10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 ZSWIM3Q96MP5 696 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 ZMAT2Q96NC0 199 aaKnown RBP10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 CNTNAP3BQ96NU0 1288 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 NTPCRQ9BSD7 190 aaKnown RBP10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 KIFC3Q9BVG8 833 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 CNTNAP3Q9BZ76 1288 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 GPR88Q9GZN0 384 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 BHMT2Q9H2M3 363 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 LMAN1LQ9HAT1 526 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 CYP4F11Q9HBI6 524 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 POLD4Q9HCU8 107 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 FBXL5Q9UKA1 691 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 CDV3Q9UKY7 258 aaKnown RBP10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 RBM19Q9Y4C8 960 aaKnown RBP10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 INSL5Q9Y5Q6 135 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 PHLPP2Q6ZVD8 1323 aa10.8□□□□□ -0.68
TRAFD1-207ENST00000550051 COL4A2P08572 1712 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 PODXLO00592 558 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 NRG2O14511 850 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 JAK2O60674 1132 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 LRP3O75074 770 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 MOSPD3O75425 235 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 LARGE1O95461 756 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 OR52Z1P0C646 297 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 MCF2P10911 925 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 CHRNB1P11230 501 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 PROZP22891 400 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 NPTX2P47972 431 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 CCR3P51677 355 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 SAFBQ15424 915 aaKnown RBP eCLIP10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 ZNF174Q15697 407 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 HAUS3Q68CZ6 603 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 LAIR1Q6GTX8 287 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 IQCEQ6IPM2 695 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 VITQ6UXI7 678 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 PDZD4Q76G19 769 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 MFSD6LQ8IWD5 586 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 C4orf32Q8N8J7 132 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 CEP120Q8N960 986 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 DEPDC1BQ8WUY9 529 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 E2F7Q96AV8 911 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 ACAP3Q96P50 834 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 MRPL4Q9BYD3 311 aaKnown RBP10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 CDT1Q9H211 546 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 FOXP1Q9H334 677 aaPredicted RBP10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 C17orf75Q9HAS0 396 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 PARD6AQ9NPB6 346 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 CNTN3Q9P232 1028 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 AFF4Q9UHB7 1163 aaKnown RBP10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 NDRG2Q9UN36 371 aaKnown RBP10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 KIAA1024Q9UPX6 916 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 NCOR2Q9Y618 2525 aa10.79□□□□□ -0.68
TRAFD1-207ENST00000550051 TICRRQ7Z2Z1 1910 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 ARNTLO00327 626 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 ABLIM1O14639 778 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 ZNF263O14978 683 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 RETP07949 1114 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 GDI1P31150 447 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 CNR2P34972 360 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 CCT6AP40227 531 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 CXCL12P48061 93 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 ARPP19P56211 112 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 PEX3P56589 373 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 GRM2Q14416 872 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 CTXN3Q4LDR2 81 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 C1orf228Q6PIY5 440 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 DAW1Q8N136 415 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 ELMOD1Q8N336 334 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 APPL2Q8NEU8 664 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 BEST2Q8NFU1 509 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 DDX12PQ92771 950 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 MSANTD3Q96H12 275 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 TARS2Q9BW92 718 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 OXCT2Q9BYC2 517 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 CEP72Q9P209 647 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 ARHGAP28Q9P2N2 729 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 KCNG1Q9UIX4 513 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 GMEB2Q9UKD1 530 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 RAB23Q9ULC3 237 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 NUB1Q9Y5A7 615 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 RALGAPA1Q6GYQ0 2036 aa10.78□□□□□ -0.68
TRAFD1-207ENST00000550051 PDCD11Q14690 1871 aaKnown RBP10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 DCDC2BA2VCK2 349 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 CCDC169A6NNP5 214 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 MEFVO15553 781 aaPredicted RBP10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 OAZ2O95190 189 aa10.77□□□□□ -0.69
TRAFD1-207ENST00000550051 PAPSS2O95340 614 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms