RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 RPF1Q9H9Y2 349 aaKnown RBP11.37□□□□□ -0.59
CCDC38-207ENST00000549752 IGSF9Q9P2J2 1179 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 MTRRQ9UBK8 725 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 CACNG4Q9UBN1 327 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 CDH22Q9UJ99 828 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 FBXO2Q9UK22 296 aaPredicted RBP11.37□□□□□ -0.59
CCDC38-207ENST00000549752 FBXW11Q9UKB1 542 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 BACE2Q9Y5Z0 518 aa11.37□□□□□ -0.59
CCDC38-207ENST00000549752 WDFY4Q6ZS81 3184 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 ARHGEF37A1IGU5 675 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 POU2F2P09086 479 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 SPATA31D3P0C874 917 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 RPL17P18621 184 aaKnown RBP11.36□□□□□ -0.59
CCDC38-207ENST00000549752 CYP3A5P20815 502 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 GBP2P32456 591 aaPredicted RBP11.36□□□□□ -0.59
CCDC38-207ENST00000549752 ELF1P32519 619 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 STAT6P42226 847 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 GTF2BQ00403 316 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 GRIN1Q05586 938 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 ALCAMQ13740 583 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 POSTNQ15063 836 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 SLC10A6Q3KNW5 377 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 SPATA31D4Q6ZUB0 917 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 FBXL6Q8N531 539 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 MSTO1Q9BUK6 570 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 GOLGA2P5Q9HBQ8 144 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 LIMD1Q9UGP4 676 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 UBQLN1Q9UMX0 589 aaKnown RBP11.36□□□□□ -0.59
CCDC38-207ENST00000549752 EXOC7Q9UPT5 735 aa11.36□□□□□ -0.59
CCDC38-207ENST00000549752 TTC26A0AVF1 554 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 PPP6R2O75170 966 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 RFPL2O75678 378 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 C8AP07357 584 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 CXCL8P10145 99 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 TKTP29401 623 aaKnown RBP11.35□□□□□ -0.59
CCDC38-207ENST00000549752 LRPAP1P30533 357 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 MCM4P33991 863 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 OR1D2P34982 312 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 NASPP49321 788 aaPredicted RBP11.35□□□□□ -0.59
CCDC38-207ENST00000549752 AMPD3Q01432 767 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 POU5F1Q01860 360 aaKnown RBP11.35□□□□□ -0.59
CCDC38-207ENST00000549752 TDGQ13569 410 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 ATL3Q6DD88 541 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 STXBP4Q6ZWJ1 553 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 MAP4K3Q8IVH8 894 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 SUSD3Q96L08 255 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 ZMAT2Q96NC0 199 aaKnown RBP11.35□□□□□ -0.59
CCDC38-207ENST00000549752 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 IRF2BPLQ9H1B7 796 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 CXCL16Q9H2A7 254 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 CUEDC2Q9H467 287 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 MRPL44Q9H9J2 332 aaKnown RBP11.35□□□□□ -0.59
CCDC38-207ENST00000549752 MAFFQ9ULX9 164 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 DERAQ9Y315 318 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 CDY1Q9Y6F8 540 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 DENND4CQ5VZ89 1909 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 TSC2P49815 1807 aa11.35□□□□□ -0.59
CCDC38-207ENST00000549752 A0A0B4J269 797 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 SPTLC2O15270 562 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 YEATS4O95619 227 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 BRCC3P46736 316 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-207ENST00000549752 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
CCDC38-207ENST00000549752 AXDND1Q5T1B0 1012 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-207ENST00000549752 TPGS2Q68CL5 300 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 SLC8B1Q6J4K2 584 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 ZNF280DQ6N043 979 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 FAM173BQ6P4H8 233 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 DYMQ7RTS9 669 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 ZNF720Q7Z2F6 126 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 CCDC65Q8IXS2 484 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 BEST2Q8NFU1 509 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 C18orf25Q96B23 403 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-207ENST00000549752 ZNF707Q96C28 371 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-207ENST00000549752 ASIC4Q96FT7 647 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 CLIC6Q96NY7 704 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 ASB7Q9H672 318 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 OLFML3Q9NRN5 406 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 EPS15L1Q9UBC2 864 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 RAPGEFL1Q9UHV5 662 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 ADGRG1Q9Y653 693 aa11.34□□□□□ -0.59
CCDC38-207ENST00000549752 PRRG1O14668 218 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 CUTAO60888 179 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 LDHAP00338 332 aaKnown RBP11.33□□□□□ -0.6
CCDC38-207ENST00000549752 LRG1P02750 347 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 ASGR2P07307 311 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 ADRB2P07550 413 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 MYBP10242 640 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 FSHRP23945 695 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
CCDC38-207ENST00000549752 CTXN3Q4LDR2 81 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 ADALQ6DHV7 355 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 USP49Q70CQ1 688 aa11.33□□□□□ -0.6
CCDC38-207ENST00000549752 GET4Q7L5D6 327 aaPredicted RBP11.33□□□□□ -0.6
CCDC38-207ENST00000549752 USP37Q86T82 979 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms