RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 MBTD1Q05BQ5 628 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 TWF1Q12792 350 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 LMAN2Q12907 356 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 SEMA3BQ13214 749 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 PCBP1Q15365 356 aaKnown RBP eCLIP8.35□□□□□ -1.07
LETMD1-219ENST00000549395 NAB2Q15742 525 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 ARHGAP29Q52LW3 1261 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 TRIM61Q5EBN2 209 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 STXBP5Q5T5C0 1151 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 SLC8B1Q6J4K2 584 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 B4GALNT3Q6L9W6 998 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 FSTL4Q6MZW2 842 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 SLC27A1Q6PCB7 646 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 HAUS6Q7Z4H7 955 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 ZNF605Q86T29 641 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 ARID3BQ8IVW6 561 aaPredicted RBP8.35□□□□□ -1.07
LETMD1-219ENST00000549395 TCEAL8Q8IYN2 117 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 REXO1Q8N1G1 1221 aaKnown RBP8.35□□□□□ -1.07
LETMD1-219ENST00000549395 SHKBP1Q8TBC3 707 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 SLC39A7Q92504 469 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 UBL7Q96S82 380 aaPredicted RBP8.35□□□□□ -1.07
LETMD1-219ENST00000549395 GPR88Q9GZN0 384 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 ASAH2Q9NR71 780 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 RAI2Q9Y5P3 530 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 MYO18BQ8IUG5 2567 aa8.35□□□□□ -1.07
LETMD1-219ENST00000549395 HECTD1Q9ULT8 2610 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 A0A1W2PRU2 124 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 DPYSL4O14531 572 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 B3GAT3O94766 335 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 APBB3O95704 486 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 EGFP01133 1207 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 ENGP17813 658 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 BCKDHBP21953 392 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 RFC5P40937 340 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 BRCC3P46736 316 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 EPHA5P54756 1037 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 CACNB1Q02641 598 aaPredicted RBP8.34□□□□□ -1.07
LETMD1-219ENST00000549395 GRSF1Q12849 480 aaKnown RBP eCLIP8.34□□□□□ -1.07
LETMD1-219ENST00000549395 EMC2Q15006 297 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 ITPRIPL2Q3MIP1 535 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 TMEM196Q5HYL7 178 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 B3GNT9Q6UX72 402 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 CD300LGQ6UXG3 332 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 EXOC8Q8IYI6 725 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 TCP11Q8WWU5 503 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 NUSAP1Q9BXS6 441 aaKnown RBP8.34□□□□□ -1.07
LETMD1-219ENST00000549395 TPSD1Q9BZJ3 242 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 ZMYND12Q9H0C1 365 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 C6orf50Q9HD87 102 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 RBM28Q9NW13 759 aaKnown RBP8.34□□□□□ -1.07
LETMD1-219ENST00000549395 EBF1Q9UH73 591 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 EVLQ9UI08 416 aaPredicted RBP8.34□□□□□ -1.07
LETMD1-219ENST00000549395 MBD1Q9UIS9 605 aaPredicted RBP8.34□□□□□ -1.07
LETMD1-219ENST00000549395 PTPRDP23468 1912 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 ZNF462Q96JM2 2506 aa8.34□□□□□ -1.07
LETMD1-219ENST00000549395 CEP192Q8TEP8 1941 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 A0A1B0GUA9 196 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 ESYT2A0FGR8 921 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 UPK3BL1B0FP48 263 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 UPK3BL2E5RIL1 263 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 TMEM189-UBE2V1I3L0A0 370 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 CLCNKBP51801 687 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 DMC1Q14565 340 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 RTN1Q16799 776 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 PFKFB3Q16875 520 aaPredicted RBP8.33□□□□□ -1.08
LETMD1-219ENST00000549395 USP39Q53GS9 565 aaKnown RBP8.33□□□□□ -1.08
LETMD1-219ENST00000549395 APOA5Q6Q788 366 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 CCNI2Q6ZMN8 369 aaPredicted RBP8.33□□□□□ -1.08
LETMD1-219ENST00000549395 SYNE3Q6ZMZ3 975 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 IFNLR1Q8IU57 520 aaPredicted RBP8.33□□□□□ -1.08
LETMD1-219ENST00000549395 PNPLA1Q8N8W4 532 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 LEMD2Q8NC56 503 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 C3orf58Q8NDZ4 430 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 RPLP0P6Q8NHW5 317 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 CHFRQ96EP1 664 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 MTRQ99707 1265 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 FBRSL1Q9HCM7 1045 aaKnown RBP8.33□□□□□ -1.08
LETMD1-219ENST00000549395 FSCN3Q9NQT6 498 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 TMEM74BQ9NUR3 256 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 WRAP73Q9P2S5 460 aaPredicted RBP8.33□□□□□ -1.08
LETMD1-219ENST00000549395 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 GON4LQ3T8J9 2241 aa8.33□□□□□ -1.08
LETMD1-219ENST00000549395 ZNF638Q14966 1978 aaKnown RBP8.32□□□□□ -1.08
LETMD1-219ENST00000549395 TK2O00142 265 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 EML1O00423 815 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 TRDMT1O14717 391 aaKnown RBP8.32□□□□□ -1.08
LETMD1-219ENST00000549395 TBX3O15119 743 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 TRAPPC3O43617 180 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 RECQL4O94761 1208 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 PRAMEF12O95522 483 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 QARSP47897 775 aaKnown RBP8.32□□□□□ -1.08
LETMD1-219ENST00000549395 USP11P51784 963 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 HDAC1Q13547 482 aaPredicted RBP8.32□□□□□ -1.08
LETMD1-219ENST00000549395 CAPSQ13938 189 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 TFDP1Q14186 410 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 MXD4Q14582 209 aaPredicted RBP8.32□□□□□ -1.08
LETMD1-219ENST00000549395 PTPAQ15257 358 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 GLRA4Q5JXX5 417 aa8.32□□□□□ -1.08
LETMD1-219ENST00000549395 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms