RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 GJB1P08034 283 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 PRCPP42785 496 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 SCNN1GP51170 649 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 YWHAEP62258 255 aaKnown RBP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 EMC2Q15006 297 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 STK38Q15208 465 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 MAP9Q49MG5 647 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 GAS2L3Q86XJ1 694 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 CCDC60Q8IWA6 550 aaPredicted RBP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 SH3TC2Q8TF17 1288 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 FOXP3Q9BZS1 431 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 HAPLN2Q9GZV7 340 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.3□□□□□ -1.56
SCAF11-212ENST00000549162 TMEM260Q9NX78 707 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 DACT1Q9NYF0 836 aa5.3□□□□□ -1.56
SCAF11-212ENST00000549162 PSMA7O14818 248 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ZBTB39O15060 712 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 OGTO15294 1046 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ARHGAP6O43182 974 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 TCEA3O75764 348 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CLTAP09496 248 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PSMC2P35998 433 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 SLC18A1P54219 525 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PSMC1P62191 440 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CAPSQ13938 189 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 GLE1Q53GS7 698 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ZFYVE27Q5T4F4 411 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 MEI1Q5TIA1 1274 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 SYDE1Q6ZW31 735 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 KLHDC8AQ8IYD2 350 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 KIAA0319LQ8IZA0 1049 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PARD3BQ8TEW8 1205 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ERCC4Q92889 916 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 RUSC1Q9BVN2 902 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 RBSNQ9H1K0 784 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 LARSQ9P2J5 1176 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ADGRA3Q8IWK6 1321 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ARVCFO00192 962 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CCNT1O60563 726 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 KINO60870 393 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 TMEM253P0C7T8 217 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 FGFR3P22607 806 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PLA2G4AP47712 749 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 COPB1P53618 953 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 UGCGQ16739 394 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 SHROOM1Q2M3G4 852 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 FAM26FQ5R3K3 315 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 MFSD14CQ5VZR4 134 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ASTLQ6HA08 431 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 WDR59Q6PJI9 974 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 BLOC1S3Q6QNY0 202 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 C11orf96Q7Z7L8 435 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CREBRFQ8IUR6 639 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 KIFC2Q96AC6 838 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CDCA3Q99618 268 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 TP53BP1Q12888 1972 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 FAM205CA6NFA0 338 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 GPR25O00155 361 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ZSCAN20P17040 1043 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CTHP32929 405 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CYP2C18P33260 490 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ETFBP38117 255 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 HMGCS2P54868 508 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 BFSP1Q12934 665 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CRHR2Q13324 411 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 STIM1Q13586 685 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 KLHDC7AQ5VTJ3 777 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 SPECC1LQ69YQ0 1117 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ISM2Q6H9L7 571 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PLEKHA7Q6IQ23 1121 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 KCTD1Q719H9 257 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 BHLHA9Q7RTU4 235 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 GPD1LQ8N335 351 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 NTAN1Q96AB6 310 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 C18orf25Q96B23 403 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 MCRS1Q96EZ8 462 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 SLC4A5Q9BY07 1137 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 TXLNGYQ9BZA5 131 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PANK4Q9NVE7 773 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 RAB21Q9UL25 225 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 KCNJ14Q9UNX9 436 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 BCLAF3A2AJT9 711 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 POTEB2H3BUK9 544 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 GDF11O95390 407 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 IL1BP01584 269 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PTPN9P43378 593 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 NPTX2P47972 431 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 BPIFB4P59827 614 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 MRPS6P82932 125 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PRKCEQ02156 737 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 FOXD4Q12950 439 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 SEMA3BQ13214 749 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 HEATR3Q7Z4Q2 680 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PGBD3Q8N328 593 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 LEMD2Q8NC56 503 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 TRIB2Q92519 343 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 ZKSCAN4Q969J2 545 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 COA7Q96BR5 231 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms