RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 GSTCDQ8NEC7 633 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 PLEKHA4Q9H4M7 779 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 CHST7Q9NS84 486 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 PANK4Q9NVE7 773 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 SNTG2Q9NY99 539 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 HPSEQ9Y251 543 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 PRG3Q9Y2Y8 225 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 NUMBLQ9Y6R0 609 aa17.17■□□□□ 0.34
CHMP1A-206ENST00000549139 CFAP47Q6ZTR5 3102 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 PDCD11Q14690 1871 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 A0A1B0GVL5 298 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 F8W810 466 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 PIGRP01833 764 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 SPATA31D3P0C874 917 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 MCF2P10911 925 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 IDEP14735 1019 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 PFKFB1P16118 471 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 MLH1P40692 756 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 ZNF528Q3MIS6 628 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 ZNF568Q3ZCX4 644 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 LILRA6Q6PI73 481 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 ELMSAN1Q6PJG2 1045 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 SPATA31D4Q6ZUB0 917 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 CCDC65Q8IXS2 484 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 ST13P5Q8NFI4 369 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 HVCN1Q96D96 273 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 TCHPQ9BT92 498 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 RPP25Q9BUL9 199 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 STRA6Q9BX79 667 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 PRKD2Q9BZL6 878 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 TRIM9Q9C026 710 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 CDT1Q9H211 546 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 GDPD2Q9HCC8 539 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 OLFML3Q9NRN5 406 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 ZDHHC7Q9NXF8 308 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 COL4A3Q01955 1670 aa17.16■□□□□ 0.34
CHMP1A-206ENST00000549139 PATJQ8NI35 1801 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 TGM5O43548 720 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 SLFN14P0C7P3 912 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 GRM5P41594 1212 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 GPC5P78333 572 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 CEP57L1Q8IYX8 460 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 BORCS6Q96GS4 357 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 ZBTB45Q96K62 511 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 ZFP42Q96MM3 310 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 DDX23Q9BUQ8 820 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 MRPL44Q9H9J2 332 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 KLK14Q9P0G3 267 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 SERTAD1Q9UHV2 236 aa17.15■□□□□ 0.34
CHMP1A-206ENST00000549139 CLDN3O15551 220 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 KINO60870 393 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 PPP1R37O75864 691 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 RECQL4O94761 1208 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 OR1G1P47890 313 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 LIG4P49917 911 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 SCNN1GP51170 649 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 MCL1Q07820 350 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 GRIK3Q13003 919 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 ZC2HC1CQ53FD0 456 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 GET4Q7L5D6 327 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 PALB2Q86YC2 1186 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 MAP4K3Q8IVH8 894 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 GPR65Q8IYL9 337 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 FGF14Q92915 247 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 BICD1Q96G01 975 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 GDAQ9Y2T3 454 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 PCDHB13Q9Y5F0 798 aa17.14■□□□□ 0.33
CHMP1A-206ENST00000549139 SPTLC1O15269 473 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 ACTN4O43707 911 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 SYKP43405 635 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 ATXN1P54253 815 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 ALCAMQ13740 583 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 NOLC1Q14978 699 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 VARS2Q5ST30 1063 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 CEP120Q8N960 986 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 SHDQ96IW2 340 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 B3GALT6Q96L58 329 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 ACAP3Q96P50 834 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 PIDD1Q9HB75 910 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 CHMP5Q9NZZ3 219 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 TBC1D7Q9P0N9 293 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 FNIP2Q9P278 1114 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 FBXO4Q9UKT5 387 aa17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 ZFP37Q9Y6Q3 630 aaPredicted RBP17.13■□□□□ 0.33
CHMP1A-206ENST00000549139 ANK1P16157 1881 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 PVALEFA0A1B0GWK0 134 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 KANSL1LA0AUZ9 987 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 HNRNPDLO14979 420 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 ZMYND10O75800 440 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 THP07101 528 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 AFMP43652 599 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 NDUFA8P51970 172 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 YARSP54577 528 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 ASIC1P78348 528 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 XKR4Q5GH76 650 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 PARM1Q6UWI2 310 aa17.12■□□□□ 0.33
CHMP1A-206ENST00000549139 ALKAL1Q6UXT8 129 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms