RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 COLEC11Q9BWP8 271 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 SPG21Q9NZD8 308 aa22.76■■□□□ 1.23
CACNB3-210ENST00000548874 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.76■■□□□ 1.23
CACNB3-210ENST00000548874 EFEMP2O95967 443 aa22.75■■□□□ 1.23
CACNB3-210ENST00000548874 ITGB1P05556 798 aa22.75■■□□□ 1.23
CACNB3-210ENST00000548874 RB1P06400 928 aa22.75■■□□□ 1.23
CACNB3-210ENST00000548874 IGFBP6P24592 240 aaPredicted RBP22.75■■□□□ 1.23
CACNB3-210ENST00000548874 POLR2BP30876 1174 aaKnown RBP22.75■■□□□ 1.23
CACNB3-210ENST00000548874 MTIF2P46199 727 aaKnown RBP22.75■■□□□ 1.23
CACNB3-210ENST00000548874 KRT39Q6A163 491 aa22.75■■□□□ 1.23
CACNB3-210ENST00000548874 TMEM265A0A087WTH1 108 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 PMM2O15305 246 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 B3GAT3O94766 335 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 VNN1O95497 513 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 MXI1P50539 228 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 RBP5P82980 135 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 PLCB3Q01970 1234 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 KCNH2Q12809 1159 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 MAN2A1Q16706 1144 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 CBWD6Q4V339 395 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 CBWD3Q5JTY5 395 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 CBWD5Q5RIA9 395 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 CREBRFQ8IUR6 639 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 LRRC52Q8N7C0 313 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 TUBGCP2Q9BSJ2 902 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 ADAM28Q9UKQ2 775 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 AGAP1Q9UPQ3 857 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 LAMA3Q16787 3333 aa22.74■■□□□ 1.23
CACNB3-210ENST00000548874 FGF18O76093 207 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 CST3P01034 146 aaPredicted RBP22.73■■□□□ 1.23
CACNB3-210ENST00000548874 AFPP02771 609 aaKnown RBP22.73■■□□□ 1.23
CACNB3-210ENST00000548874 FMO5P49326 533 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 AARSP49588 968 aaKnown RBP eCLIP22.73■■□□□ 1.23
CACNB3-210ENST00000548874 BIRC3Q13489 604 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 KRT31Q15323 416 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 MIIPQ5JXC2 388 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 RNF168Q8IYW5 571 aaPredicted RBP22.73■■□□□ 1.23
CACNB3-210ENST00000548874 KLHL23Q8NBE8 558 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 MMRN2Q9H8L6 949 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 LIMA1Q9UHB6 759 aaKnown RBP22.73■■□□□ 1.23
CACNB3-210ENST00000548874 MTUS1Q9ULD2 1270 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 COQ4Q9Y3A0 265 aa22.73■■□□□ 1.23
CACNB3-210ENST00000548874 LAMA2P24043 3122 aaKnown RBP22.73■■□□□ 1.23
CACNB3-210ENST00000548874 N4BP1O75113 896 aaKnown RBP22.72■■□□□ 1.23
CACNB3-210ENST00000548874 PHACTR2O75167 634 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 KRT19P08727 400 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 ATP1A3P13637 1013 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 PAX3P23760 479 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 PNPLA4P41247 253 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 LILRA4P59901 499 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 NCOA4Q13772 614 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 HABP4Q5JVS0 413 aaKnown RBP22.72■■□□□ 1.23
CACNB3-210ENST00000548874 APTXQ7Z2E3 356 aaKnown RBP22.72■■□□□ 1.23
CACNB3-210ENST00000548874 TAS1R2Q8TE23 839 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 TMEM169Q96HH4 297 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 ZNF560Q96MR9 790 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 C11orf84Q9BUA3 381 aaPredicted RBP22.72■■□□□ 1.23
CACNB3-210ENST00000548874 VN1R3Q9BXE9 311 aa22.72■■□□□ 1.23
CACNB3-210ENST00000548874 SCN1AP35498 2009 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 LRRC10BA6NIK2 292 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 SPTLC1O15269 473 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 P4HA2O15460 535 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 TADA2AO75478 443 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 STAU1O95793 577 aaKnown RBP22.71■■□□□ 1.23
CACNB3-210ENST00000548874 HLA-DRAP01903 254 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 TAF6P49848 677 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 TRPC3Q13507 836 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 VWA3BQ502W6 1294 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 FUT10Q6P4F1 479 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 FBXO22Q8NEZ5 403 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 HASPINQ8TF76 798 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 XYLT2Q9H1B5 865 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 ZNF576Q9H609 170 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 VRTNQ9H8Y1 702 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 TAB2Q9NYJ8 693 aa22.71■■□□□ 1.23
CACNB3-210ENST00000548874 GOLGA6L19H0YKK7 550 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 H3BNC9 293 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 PRKCSHP14314 528 aaPredicted RBP22.7■■□□□ 1.22
CACNB3-210ENST00000548874 ATICP31939 592 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 BRCC3P46736 316 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 MYL6P60660 151 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 TPM4P67936 248 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 MYL7Q01449 175 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 TIGD5Q53EQ6 642 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 DDX53Q86TM3 631 aaKnown RBP22.7■■□□□ 1.22
CACNB3-210ENST00000548874 GAS2L3Q86XJ1 694 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 FBXL13Q8NEE6 735 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 ANKRD20A12PQ8NF67 263 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 LRCH3Q96II8 777 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 HPDLQ96IR7 371 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 SUSD3Q96L08 255 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 GPR62Q9BZJ7 368 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 NDST4Q9H3R1 872 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 CERS4Q9HA82 394 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 LZTS1Q9Y250 596 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 NUB1Q9Y5A7 615 aa22.7■■□□□ 1.22
CACNB3-210ENST00000548874 SF3B1O75533 1304 aaKnown RBP eCLIP22.7■■□□□ 1.22
CACNB3-210ENST00000548874 CHD9Q3L8U1 2897 aa22.69■■□□□ 1.22
CACNB3-210ENST00000548874 EPOPA6NHQ4 379 aa22.69■■□□□ 1.22
CACNB3-210ENST00000548874 CDK11BP21127 795 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms