RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 MEFVO15553 781 aaPredicted RBP7.32□□□□□ -1.24
SCAF11-211ENST00000547950 PI15O43692 258 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 XYLBO75191 536 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 FAM13AO94988 1023 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 HNRNPA1P09651 372 aaKnown RBP eCLIP7.32□□□□□ -1.24
SCAF11-211ENST00000547950 KCNE1P15382 129 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 RFX1P22670 979 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 PROZP22891 400 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 ELF1P32519 619 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 RPL9P32969 192 aaKnown RBP7.32□□□□□ -1.24
SCAF11-211ENST00000547950 CLCN5P51795 746 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 MCM6Q14566 821 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 KARSQ15046 597 aaKnown RBP7.32□□□□□ -1.24
SCAF11-211ENST00000547950 SLC10A6Q3KNW5 377 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 TMEM119Q4V9L6 283 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 XKR4Q5GH76 650 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 SPECC1Q5M775 1068 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 SMYD5Q6GMV2 418 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 ANKS3Q6ZW76 656 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 HAUS6Q7Z4H7 955 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 BRAPQ7Z569 592 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 GPBP1Q86WP2 473 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 SIX5Q8N196 739 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 TMEM130Q8N3G9 435 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 SNX27Q96L92 541 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 REEP2Q9BRK0 252 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 RPP25Q9BUL9 199 aaKnown RBP7.32□□□□□ -1.24
SCAF11-211ENST00000547950 KCND2Q9NZV8 630 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 EPS15L1Q9UBC2 864 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 MTRRQ9UBK8 725 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 FBXW11Q9UKB1 542 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 DUSP12Q9UNI6 340 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 BACE2Q9Y5Z0 518 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 ATG2AQ2TAZ0 1938 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 LCE2BO14633 110 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 PRRG1O14668 218 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 TRAK2O60296 914 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 BMP15O95972 392 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 S1PR4O95977 384 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 CXCL8P10145 99 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 NPR3P17342 541 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 PLCG1P19174 1290 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 MARCKSP29966 332 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-211ENST00000547950 MCM4P33991 863 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 DDIT3P35638 169 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 LONP1P36776 959 aaKnown RBP7.31□□□□□ -1.24
SCAF11-211ENST00000547950 TNFSF9P41273 254 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 SLC19A1P41440 591 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 LIG4P49917 911 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 CEBPZQ03701 1054 aaKnown RBP7.31□□□□□ -1.24
SCAF11-211ENST00000547950 MCL1Q07820 350 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 NOLC1Q14978 699 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCAF11-211ENST00000547950 UVSSAQ2YD98 709 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 CTXN3Q4LDR2 81 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 FAM173BQ6P4H8 233 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 PARM1Q6UWI2 310 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 ZPBP2Q6X784 338 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 ZNF461Q8TAF7 563 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 ITFG1Q8TB96 612 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 LRRC15Q8TF66 581 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 FGF13Q92913 245 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 NXPE3Q969Y0 559 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 EPSTI1Q96J88 318 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 PANK2Q9BZ23 570 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 HAPLN2Q9GZV7 340 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 IRF2BPLQ9H1B7 796 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 CYP4F11Q9HBI6 524 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 BLOC1S4Q9NUP1 217 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 HCFC1R1Q9NWW0 138 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 CNTN3Q9P232 1028 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 DNMT3BQ9UBC3 853 aaKnown RBP7.31□□□□□ -1.24
SCAF11-211ENST00000547950 WNT16Q9UBV4 365 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 TUBGCP4Q9UGJ1 667 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 CDH7Q9ULB5 785 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 ODF2LQ9ULJ1 636 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 CA14Q9ULX7 337 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 TBX20Q9UMR3 447 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 CLIC4Q9Y696 253 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 NUMBLQ9Y6R0 609 aa7.31□□□□□ -1.24
SCAF11-211ENST00000547950 KRBA1A5PL33 1030 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 LACTBL1A8MY62 500 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 ANHXE9PGG2 379 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 H7C4K7 107 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 K7ENM7 598 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 HNRNPDLO14979 420 aaKnown RBP7.3□□□□□ -1.24
SCAF11-211ENST00000547950 SYN3O14994 580 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 SLC26A4O43511 780 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 TBCAO75347 108 aaKnown RBP7.3□□□□□ -1.24
SCAF11-211ENST00000547950 PAPLNO95428 1278 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 CLTAP09496 248 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 SRFP11831 508 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 PTPN2P17706 415 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 PDCP20941 246 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 SYT1P21579 422 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 FECHP22830 423 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 NMT1P30419 496 aaKnown RBP7.3□□□□□ -1.24
SCAF11-211ENST00000547950 HOXA9P31269 272 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 NCKAP1LP55160 1127 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 GPC5P78333 572 aa7.3□□□□□ -1.24
SCAF11-211ENST00000547950 ROR1Q01973 937 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms