RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SNRPFP62306 86 aaKnown RBP12.82□□□□□ -0.36
HDAC4-216ENST00000544989 NUCB2P80303 420 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 RAB33AQ14088 237 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 CD300LGQ6UXG3 332 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 UNC13DQ70J99 1090 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 ALYREFQ86V81 257 aaKnown RBP12.82□□□□□ -0.36
HDAC4-216ENST00000544989 ZDHHC14Q8IZN3 488 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 C12orf76Q8N812 135 aaPredicted RBP12.82□□□□□ -0.36
HDAC4-216ENST00000544989 TDRD5Q8NAT2 981 aaKnown RBP12.82□□□□□ -0.36
HDAC4-216ENST00000544989 C3orf58Q8NDZ4 430 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 LEO1Q8WVC0 666 aaPredicted RBP12.82□□□□□ -0.36
HDAC4-216ENST00000544989 CCDC34Q96HJ3 373 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 FBXW11Q9UKB1 542 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 DMDP11532 3685 aa12.82□□□□□ -0.36
HDAC4-216ENST00000544989 CACNA1HO95180 2353 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 MYO15AQ9UKN7 3530 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 MEFVO15553 781 aaPredicted RBP12.81□□□□□ -0.36
HDAC4-216ENST00000544989 ZMYND10O75800 440 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 MYBP10242 640 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 RPL17P18621 184 aaKnown RBP12.81□□□□□ -0.36
HDAC4-216ENST00000544989 OR1D2P34982 312 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 FAM26FQ5R3K3 315 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 TPGS2Q68CL5 300 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 SLC8B1Q6J4K2 584 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 ZNF280DQ6N043 979 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 CACTINQ8WUQ7 758 aaKnown RBP12.81□□□□□ -0.36
HDAC4-216ENST00000544989 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
HDAC4-216ENST00000544989 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 PRKD2Q9BZL6 878 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 PIDD1Q9HB75 910 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 KIAA1586Q9HCI6 787 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 WDR6Q9NNW5 1121 aaKnown RBP12.81□□□□□ -0.36
HDAC4-216ENST00000544989 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 CGNQ9P2M7 1197 aaKnown RBP12.81□□□□□ -0.36
HDAC4-216ENST00000544989 TUBGCP4Q9UGJ1 667 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 WDR87Q6ZQQ6 2873 aa12.81□□□□□ -0.36
HDAC4-216ENST00000544989 A0A1W2PQ27 194 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 A0A1W2PQ64 194 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 A0A1W2PQD8 194 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 M0QZQ0 153 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 EXTL3O43909 919 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 TYMPP19971 482 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 ADSSP30520 456 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 ELF1P32519 619 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 BRCC3P46736 316 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 AARSP49588 968 aaKnown RBP eCLIP12.8□□□□□ -0.362e-6■■■■■ 44.6
HDAC4-216ENST00000544989 ACOT2P49753 483 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 MRPL58Q14197 206 aaKnown RBP12.8□□□□□ -0.36
HDAC4-216ENST00000544989 SURF1Q15526 300 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 PPM1LQ5SGD2 360 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
HDAC4-216ENST00000544989 ZBTB41Q5SVQ8 909 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 JADE1Q6IE81 842 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 ARMCX5Q6P1M9 558 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 USP37Q86T82 979 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 GLYCTKQ8IVS8 523 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 ZNF461Q8TAF7 563 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 MUTYHQ9UIF7 546 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 DSEQ9UL01 958 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 ZDHHC9Q9Y397 364 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 CDY1Q9Y6F8 540 aa12.8□□□□□ -0.36
HDAC4-216ENST00000544989 ZFP37Q9Y6Q3 630 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-216ENST00000544989 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
HDAC4-216ENST00000544989 PDCD11Q14690 1871 aaKnown RBP12.79□□□□□ -0.36
HDAC4-216ENST00000544989 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
HDAC4-216ENST00000544989 C8AP07357 584 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 ODC1P11926 461 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 PFKFB1P16118 471 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 PNPLA4P41247 253 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 CASP5P51878 434 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 YWHAHQ04917 246 aaPredicted RBP12.79□□□□□ -0.36
HDAC4-216ENST00000544989 KCNA1Q09470 495 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 PSMD2Q13200 908 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 DSTYKQ6XUX3 929 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 HS2ST1Q7LGA3 356 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 BRSK2Q8IWQ3 736 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 UBALD2Q8IYN6 164 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 GPD1LQ8N335 351 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 GOLGA5Q8TBA6 731 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 ZNF507Q8TCN5 953 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 EDAQ92838 391 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 CCDC47Q96A33 483 aaKnown RBP12.79□□□□□ -0.36
HDAC4-216ENST00000544989 ZNF560Q96MR9 790 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 FAM213AQ9BRX8 229 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.79□□□□□ -0.364e-7■■■□□ 16.9
HDAC4-216ENST00000544989 CLUHO75153 1309 aa12.79□□□□□ -0.36
HDAC4-216ENST00000544989 FAM237AA0A1B0GTK4 181 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 ANO9A1A5B4 782 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 OR6C75A6NL08 312 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 C2CD4DB7Z1M9 353 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 TISP43B9A030 160 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 I3L4J1 428 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 PIRO00625 290 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 ACTN4O43707 911 aaKnown RBP12.78□□□□□ -0.36
HDAC4-216ENST00000544989 TBC1D4O60343 1298 aa12.78□□□□□ -0.36
HDAC4-216ENST00000544989 RFPL2O75678 378 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms