RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 CHRM3P20309 590 aa21■□□□□ 0.95
BPTF-208ENST00000544778 CHI3L1P36222 383 aaPredicted RBP21■□□□□ 0.95
BPTF-208ENST00000544778 EIF2B5Q13144 721 aaKnown RBP21■□□□□ 0.95
BPTF-208ENST00000544778 CCDC81Q6ZN84 652 aa21■□□□□ 0.95
BPTF-208ENST00000544778 SLC44A5Q8NCS7 719 aa21■□□□□ 0.95
BPTF-208ENST00000544778 SLC7A14Q8TBB6 771 aa21■□□□□ 0.95
BPTF-208ENST00000544778 MAPRE1Q15691 268 aaKnown RBP21■□□□□ 0.95
BPTF-208ENST00000544778 SHROOM1Q2M3G4 852 aaPredicted RBP21■□□□□ 0.95
BPTF-208ENST00000544778 WDR72Q3MJ13 1102 aa21■□□□□ 0.95
BPTF-208ENST00000544778 PNKPQ96T60 521 aa21■□□□□ 0.95
BPTF-208ENST00000544778 KRT84Q9NSB2 600 aa21■□□□□ 0.95
BPTF-208ENST00000544778 UTP6Q9NYH9 597 aaKnown RBP21■□□□□ 0.95
BPTF-208ENST00000544778 MARCOQ9UEW3 520 aaPredicted RBP21■□□□□ 0.95
BPTF-208ENST00000544778 H2AFYO75367 372 aaKnown RBP21■□□□□ 0.95
BPTF-208ENST00000544778 MCAMP43121 646 aa21■□□□□ 0.95
BPTF-208ENST00000544778 GUCY1A3Q02108 690 aa21■□□□□ 0.95
BPTF-208ENST00000544778 C18orf8Q96DM3 657 aa21■□□□□ 0.95
BPTF-208ENST00000544778 ARHGEF3Q9NR81 526 aa21■□□□□ 0.95
BPTF-208ENST00000544778 SRP72O76094 671 aaKnown RBP20.99■□□□□ 0.95
BPTF-208ENST00000544778 PBLDP30039 288 aaPredicted RBP20.99■□□□□ 0.95
BPTF-208ENST00000544778 GUCY1A2P33402 732 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 MTMR2Q13614 643 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 HIST2H2ACQ16777 129 aaPredicted RBP20.99■□□□□ 0.95
BPTF-208ENST00000544778 HIST2H2AA3Q6FI13 130 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 NSMCE4AQ9NXX6 385 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 RCOR1Q9UKL0 485 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 HNRNPRO43390 633 aaKnown RBP20.99■□□□□ 0.95
BPTF-208ENST00000544778 ENOSF1Q7L5Y1 443 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 C16orf96A6NNT2 1141 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 PLOD1Q02809 727 aaPredicted RBP20.99■□□□□ 0.95
BPTF-208ENST00000544778 RIN3Q8TB24 985 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 TAF1DQ9H5J8 278 aaPredicted RBP20.99■□□□□ 0.95
BPTF-208ENST00000544778 ACOT2P49753 483 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 IER5Q5VY09 327 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 WWP1Q9H0M0 922 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 KRCC1Q9NPI7 259 aaPredicted RBP20.99■□□□□ 0.95
BPTF-208ENST00000544778 GJB4Q9NTQ9 266 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 UTYO14607 1347 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 PALLDQ8WX93 1383 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 DGKIO75912 1065 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 SCP2P22307 547 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 TMEM143Q96AN5 459 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 NFIBO00712 420 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 SERPINB4P48594 390 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 DMTNQ08495 405 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 CCDC15Q0P6D6 951 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 DYNC1I2Q13409 638 aaKnown RBP20.99■□□□□ 0.95
BPTF-208ENST00000544778 IPMKQ8NFU5 416 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 BBS2Q9BXC9 721 aa20.99■□□□□ 0.95
BPTF-208ENST00000544778 KRT16P08779 473 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 RESTQ13127 1097 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 P3H1Q32P28 736 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 RAB6BQ9NRW1 208 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 PCMTD2Q9NV79 361 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 SLC39A10Q9ULF5 831 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 AATKQ6ZMQ8 1374 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 CLK1P49759 484 aaKnown RBP20.98■□□□□ 0.95
BPTF-208ENST00000544778 TXNRD1Q16881 649 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 USP39Q53GS9 565 aaKnown RBP20.98■□□□□ 0.95
BPTF-208ENST00000544778 ZNF438Q7Z4V0 828 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 MTERF3Q96E29 417 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 AIM2O14862 343 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 ITGA4P13612 1032 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 HSPA9P38646 679 aaKnown RBP20.98■□□□□ 0.95
BPTF-208ENST00000544778 STAT5BP51692 787 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 AP3M2P53677 418 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 RPS7P62081 194 aaKnown RBP20.98■□□□□ 0.95
BPTF-208ENST00000544778 SLC44A2Q8IWA5 706 aaPredicted RBP20.98■□□□□ 0.95
BPTF-208ENST00000544778 MCEEQ96PE7 176 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 SCN3BQ9NY72 215 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 HDAC6Q9UBN7 1215 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 F8W810 466 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 RPS6KA5O75582 802 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 HMGCS2P54868 508 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 LAMB3Q13751 1172 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 FUT11Q495W5 492 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 TNIP2Q8NFZ5 429 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 EME1Q96AY2 570 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 P4HA2O15460 535 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 ATP6V1C1P21283 382 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 C10orf120Q5SQS8 335 aa20.98■□□□□ 0.95
BPTF-208ENST00000544778 DYNC1LI2O43237 492 aaPredicted RBP20.97■□□□□ 0.95
BPTF-208ENST00000544778 PRR29P0C7W0 189 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 TAF1CQ15572 869 aaPredicted RBP20.97■□□□□ 0.95
BPTF-208ENST00000544778 RTN2O75298 545 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 KCNV1Q6PIU1 500 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 C16orf89Q6UX73 402 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 CATSPERBQ9H7T0 1116 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 KIF1BO60333 1816 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 GGPS1O95749 300 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 RABGAP1LQ5R372 815 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 NLRP14Q86W24 1093 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 PARP9Q8IXQ6 854 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 PRDX5P30044 214 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 DHX40Q8IX18 779 aaKnown RBP20.97■□□□□ 0.95
BPTF-208ENST00000544778 WNK4Q96J92 1243 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 FHOD1Q9Y613 1164 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 HPGDP15428 266 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 RCOR2Q8IZ40 523 aa20.97■□□□□ 0.95
BPTF-208ENST00000544778 STAP2Q9UGK3 403 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms