RNA–Protein interactions for RNA: ENST00000544613.5

CCDC189-208, Transcript of coiled-coil domain containing 189, humanhuman

TSL 3

Gene CCDC189, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-208ENST00000544613 COPS5Q92905 334 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 MAML3Q96JK9 1138 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 NLRP4Q96MN2 994 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 RUFY1Q96T51 708 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 RNPEPQ9H4A4 650 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 VRTNQ9H8Y1 702 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 HOMER3Q9NSC5 361 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 PARP2Q9UGN5 583 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 CEP83Q9Y592 693 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.33
CCDC189-208ENST00000544613 MYH10P35580 1976 aa12.96□□□□□ -0.34
CCDC189-208ENST00000544613 H3BRB1 525 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 MED7O43513 233 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 PHF2O75151 1096 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 STAU1O95793 577 aaKnown RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 PAEPP09466 180 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 HARSP12081 509 aaKnown RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 FNTAP49354 379 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 WNT7BP56706 349 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 NOMO3P69849 1222 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 PPFIA1Q13136 1202 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 ACVR2BQ13705 512 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 CYP1B1Q16678 543 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 DCAF12L1Q5VU92 463 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 MAP1SQ66K74 1059 aaPredicted RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 LRIG3Q6UXM1 1119 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 C12orf50Q8NA57 414 aaPredicted RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 TMEM35BQ8NCS4 154 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 AFG1LQ8WV93 481 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 ALG3Q92685 438 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 TSPAN18Q96SJ8 248 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 SH3GL2Q99962 352 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 TINF2Q9BSI4 451 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 C16orf70Q9BSU1 422 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 AP1M1Q9BXS5 423 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 CDT1Q9H211 546 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 TUT1Q9H6E5 874 aaKnown RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 ZNF408Q9H9D4 720 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 CYP3A43Q9HB55 503 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 PARVAQ9NVD7 372 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 ADAM22Q9P0K1 906 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 PCYOX1Q9UHG3 505 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 FEZ2Q9UHY8 353 aaPredicted RBP12.95□□□□□ -0.34
CCDC189-208ENST00000544613 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
CCDC189-208ENST00000544613 POLR3GO15318 223 aaPredicted RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 THAP12O43422 761 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 PSTPIP1O43586 416 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 PROSCO94903 275 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 SNAI1O95863 264 aaPredicted RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 EIF4BP23588 611 aaKnown RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 CDH5P33151 784 aaPredicted RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 CETN2P41208 172 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 TNFSF9P41273 254 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 CARSP49589 748 aaKnown RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 CLCN3P51790 818 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 RNASE9P60153 205 aaKnown RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 DR1Q01658 176 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 DCAF4L1Q3SXM0 396 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 CFAP58Q5T655 872 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 NAA35Q5VZE5 725 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 PLEKHA7Q6IQ23 1121 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 MTHFD1LQ6UB35 978 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 SYDE1Q6ZW31 735 aaPredicted RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 SLC13A5Q86YT5 568 aaPredicted RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 IFT81Q8WYA0 676 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 SLCO2A1Q92959 643 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 ADPGKQ9BRR6 497 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 MTMR12Q9C0I1 747 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 DDX47Q9H0S4 455 aaKnown RBP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 IFT122Q9HBG6 1241 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC189-208ENST00000544613 IP6K2Q9UHH9 426 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 ANAPC7Q9UJX3 599 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 NFU1Q9UMS0 254 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 DERAQ9Y315 318 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 Q9Y3F1 56 aa12.94□□□□□ -0.34
CCDC189-208ENST00000544613 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
CCDC189-208ENST00000544613 TMEM110-MUSTN1A8MSY1 372 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 FSCN2O14926 492 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 CAPN15O75808 1086 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 SYF2O95926 243 aaKnown RBP12.93□□□□□ -0.34
CCDC189-208ENST00000544613 MMP3P08254 477 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 MMP8P22894 467 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 POLR2BP30876 1174 aaKnown RBP12.93□□□□□ -0.34
CCDC189-208ENST00000544613 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 MYL6P60660 151 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 TFAMQ00059 246 aaKnown RBP12.93□□□□□ -0.34
CCDC189-208ENST00000544613 AMHR2Q16671 573 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 LRRC38Q5VT99 294 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 SPOPLQ6IQ16 392 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 IQCKQ8N0W5 287 aa12.93□□□□□ -0.34
CCDC189-208ENST00000544613 ZNF606Q8WXB4 792 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms