RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TSPY26P	Q9H489	355 aa		7.13	□□□□□ -1.27
CIT-213	ENST00000543324	DHX33	Q9H6R0	707 aa	Known RBP	7.13	□□□□□ -1.27
CIT-213	ENST00000543324	HEBP1	Q9NRV9	189 aa		7.13	□□□□□ -1.27
CIT-213	ENST00000543324	DDX25	Q9UHL0	483 aa	Known RBP	7.13	□□□□□ -1.27
CIT-213	ENST00000543324	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	7.13	□□□□□ -1.27
CIT-213	ENST00000543324	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	7.13	□□□□□ -1.27
CIT-213	ENST00000543324	CELSR2	Q9HCU4	2923 aa		7.13	□□□□□ -1.27
CIT-213	ENST00000543324	VWA8	A3KMH1	1905 aa		7.13	□□□□□ -1.27
CIT-213	ENST00000543324		A0A0U1RQF3	1178 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CCDC195	A0A1B0GUA6	201 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CCDC194	A0A1B0GVG4	234 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	TRABD2B	A6NFA1	517 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CHMP2A	O43633	222 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	LYPLA2	O95372	231 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	PAPLN	O95428	1278 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	FTH1P19	P0C7X4	201 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CCDC192	P0DO97	292 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CHRNB1	P11230	501 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	FGFR1	P11362	822 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	TNFRSF8	P28908	595 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CLCN4	P51793	760 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	PSMC5	P62195	406 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	RHD	Q02161	417 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	BMS1	Q14692	1282 aa	Known RBP	7.12	□□□□□ -1.27
CIT-213	ENST00000543324	ANKRD1	Q15327	319 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CLLU1OS	Q5K130	101 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	PDXDC1	Q6P996	788 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CPLX2	Q6PUV4	134 aa	Known RBP	7.12	□□□□□ -1.27
CIT-213	ENST00000543324	LRRC69	Q6ZNQ3	347 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	MIER3	Q7Z3K6	550 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	ZNF410	Q86VK4	478 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	ECHDC2	Q86YB7	292 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	TMC8	Q8IU68	726 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	C4orf19	Q8IY42	314 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	CKAP2L	Q8IYA6	745 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	SLC39A11	Q8N1S5	342 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	PNPLA1	Q8N8W4	532 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	TMEM87A	Q8NBN3	555 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	RSPH1	Q8WYR4	309 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	ANKRD7	Q92527	254 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	MED8	Q96G25	268 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	MS4A3	Q96HJ5	214 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	INTS4	Q96HW7	963 aa	Known RBP	7.12	□□□□□ -1.27
CIT-213	ENST00000543324	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.12	□□□□□ -1.27
CIT-213	ENST00000543324	IFT122	Q9HBG6	1241 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	C2orf42	Q9NWW7	574 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	SPG21	Q9NZD8	308 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	ORC3	Q9UBD5	711 aa	Predicted RBP	7.12	□□□□□ -1.27
CIT-213	ENST00000543324	TCEAL9	Q9UHQ7	104 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	ZDHHC9	Q9Y397	364 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	SAMM50	Q9Y512	469 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	PPME1	Q9Y570	386 aa		7.12	□□□□□ -1.27
CIT-213	ENST00000543324	HIVEP1	P15822	2718 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	CCDC163	A0A0D9SF12	145 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	DENND3	A2RUS2	1198 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	PATE3	B3GLJ2	98 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	MAN2B1	O00754	1011 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	INPPL1	O15357	1258 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	MEFV	O15553	781 aa	Predicted RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	CTIF	O43310	598 aa	Known RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	DTNB	O60941	627 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	CTSA	P10619	480 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	MYF5	P13349	255 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	TMOD1	P28289	359 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	QARS	P47897	775 aa	Known RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	IRX4	P78413	519 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	CDC42EP1	Q00587	391 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	NFX1	Q12986	1120 aa	Known RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	NR5A1	Q13285	461 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	CAMK2B	Q13554	666 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	CUL4A	Q13619	759 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	HNRNPD	Q14103	355 aa	Known RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	NOLC1	Q14978	699 aa	Known RBP eCLIP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	MTSS1L	Q765P7	747 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	IFNLR1	Q8IU57	520 aa	Predicted RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	METTL13	Q8N6R0	699 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	MTMR9	Q96QG7	549 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	PPP1R16B	Q96T49	567 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	NAP1L4	Q99733	375 aa	Known RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	TMEM117	Q9H0C3	514 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	NRBP2	Q9NSY0	501 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	SEPT9	Q9UHD8	586 aa	Predicted RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	AKT3	Q9Y243	479 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	KIF3A	Q9Y496	699 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	PCDHB7	Q9Y5E2	793 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	CIT	O14578	2027 aa		7.11	□□□□□ -1.27
CIT-213	ENST00000543324	GOLGA4	Q13439	2230 aa	Known RBP	7.11	□□□□□ -1.27
CIT-213	ENST00000543324	CRYBG3	Q68DQ2	2970 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	SYCE3	A1L190	88 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	BLACE	A4D250	179 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	HOXA2	O43364	376 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	GAS2	O43903	313 aa	Known RBP	7.1	□□□□□ -1.27
CIT-213	ENST00000543324	JAK2	O60674	1132 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	ZNF623	O75123	536 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	PRPF40A	O75400	957 aa	Known RBP	7.1	□□□□□ -1.27
CIT-213	ENST00000543324	EFEMP2	O95967	443 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	AFP	P02771	609 aa	Known RBP	7.1	□□□□□ -1.27
CIT-213	ENST00000543324	P4HB	P07237	508 aa	Known RBP	7.1	□□□□□ -1.27
CIT-213	ENST00000543324	KRT10	P13645	584 aa		7.1	□□□□□ -1.27
CIT-213	ENST00000543324	KRT2	P35908	639 aa		7.1	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms