RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 CYP4F11Q9HBI6 524 aa14.29□□□□□ -0.12
RTN3-212ENST00000543123 TUBGCP4Q9UGJ1 667 aa14.29□□□□□ -0.12
RTN3-212ENST00000543123 FBXL5Q9UKA1 691 aa14.29□□□□□ -0.12
RTN3-212ENST00000543123 TBX20Q9UMR3 447 aa14.29□□□□□ -0.12
RTN3-212ENST00000543123 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
RTN3-212ENST00000543123 CFAP54Q96N23 3096 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 TTC26A0AVF1 554 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 WDR27A2RRH5 827 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 ZNF197O14709 1029 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 OGTO15294 1046 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 TRAK2O60296 914 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 TBC1D4O60343 1298 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 RHOP08100 348 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 CPB1P15086 417 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 IGFBP6P24592 240 aaPredicted RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 LRPAP1P30533 357 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 YWHAHQ04917 246 aaPredicted RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 MRPL58Q14197 206 aaKnown RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 PDCD11Q14690 1871 aaKnown RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 KARSQ15046 597 aaKnown RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 ANGPT1Q15389 498 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 SEZ6Q53EL9 994 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 IQCEQ6IPM2 695 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 USP37Q86T82 979 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 CD302Q8IX05 232 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 KRI1Q8N9T8 703 aaKnown RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 LEMD2Q8NC56 503 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 ITFG1Q8TB96 612 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 DDX12PQ92771 950 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 RPF1Q9H9Y2 349 aaKnown RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 HCFC1R1Q9NWW0 138 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 DNMT3BQ9UBC3 853 aaKnown RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 CCDC39Q9UFE4 941 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 AFF4Q9UHB7 1163 aaKnown RBP14.28□□□□□ -0.12
RTN3-212ENST00000543123 SIT1Q9Y3P8 196 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 INSL5Q9Y5Q6 135 aa14.28□□□□□ -0.12
RTN3-212ENST00000543123 PI15O43692 258 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 ECI2O75521 394 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 MICAL2O94851 1124 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 PRKCQQ04759 706 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 PLD1Q13393 1074 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 CUL4AQ13619 759 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 MCM6Q14566 821 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 CYP4A22Q5TCH4 519 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 PDZD4Q76G19 769 aaPredicted RBP14.27□□□□□ -0.13
RTN3-212ENST00000543123 MAP4K3Q8IVH8 894 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 BEST2Q8NFU1 509 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 NKD2Q969F2 451 aaPredicted RBP14.27□□□□□ -0.13
RTN3-212ENST00000543123 CCSER1Q9C0I3 900 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 BLOC1S4Q9NUP1 217 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 STK17AQ9UEE5 414 aa14.27□□□□□ -0.13
RTN3-212ENST00000543123 A0A0B4J269 797 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 M0QZQ0 153 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 MEFVO15553 781 aaPredicted RBP14.26□□□□□ -0.13
RTN3-212ENST00000543123 DDIT3P35638 169 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 STARD6P59095 220 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 GPC5P78333 572 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 ENOX2Q16206 610 aaKnown RBP14.26□□□□□ -0.13
RTN3-212ENST00000543123 SLFN12LQ6IEE8 588 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 DSTYKQ6XUX3 929 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 PJA1Q8NG27 643 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 ING5Q8WYH8 240 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 HVCN1Q96D96 273 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 ZNF512Q96ME7 567 aaPredicted RBP14.26□□□□□ -0.13
RTN3-212ENST00000543123 KXD1Q9BQD3 176 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 CORO1BQ9BR76 489 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 SEL1LQ9UBV2 794 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 DERAQ9Y315 318 aa14.26□□□□□ -0.13
RTN3-212ENST00000543123 MYH15Q9Y2K3 1946 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 PRR23AA6NEV1 266 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 OR6C75A6NL08 312 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 LACTBL1A8MY62 500 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 FAM189A1O60320 539 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 OAZ2O95190 189 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 ODC1P11926 461 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 TNFSF9P41273 254 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 MAGEA9P43362 315 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 AARSP49588 968 aaKnown RBP eCLIP14.25□□□□□ -0.13
RTN3-212ENST00000543123 GTF2BQ00403 316 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 SPAG1Q07617 926 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 ADCY1Q08828 1119 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 MLF2Q15773 248 aaPredicted RBP14.25□□□□□ -0.13
RTN3-212ENST00000543123 ZBTB6Q15916 424 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 ZC3H14Q6PJT7 736 aaKnown RBP14.25□□□□□ -0.13
RTN3-212ENST00000543123 FRMD5Q7Z6J6 570 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 ELSPBP1Q96BH3 223 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 HAPLN2Q9GZV7 340 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 SEMA4AQ9H3S1 761 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 ST6GALNAC4Q9H4F1 302 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 ASAH2Q9NR71 780 aa14.25□□□□□ -0.13
RTN3-212ENST00000543123 DOCK6Q96HP0 2047 aa14.24□□□□□ -0.13
RTN3-212ENST00000543123 KANSL1LA0AUZ9 987 aa14.24□□□□□ -0.13
RTN3-212ENST00000543123 ADRB2P07550 413 aa14.24□□□□□ -0.13
RTN3-212ENST00000543123 CEBPBP17676 345 aa14.24□□□□□ -0.13
RTN3-212ENST00000543123 GAP43P17677 238 aa14.24□□□□□ -0.13
RTN3-212ENST00000543123 TYMPP19971 482 aa14.24□□□□□ -0.13
RTN3-212ENST00000543123 POU5F1Q01860 360 aaKnown RBP14.24□□□□□ -0.13
RTN3-212ENST00000543123 GRIN1Q05586 938 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms