RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 KXD1Q9BQD3 176 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 PLEKHA5Q9HAU0 1116 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 PARVGQ9HBI0 331 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 CYP4F11Q9HBI6 524 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 DLGAP2Q9P1A6 1054 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 KCNH3Q9ULD8 1083 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 MRPS23Q9Y3D9 190 aaKnown RBP13.14□□□□□ -0.31
PTPN6-220ENST00000543115 TIMM13Q9Y5L4 95 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-220ENST00000543115 CLIC4Q9Y696 253 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 PRR23AA6NEV1 266 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 TISP43B9A030 160 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 PRRG1O14668 218 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 PPEF2O14830 753 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 HNRNPDLO14979 420 aaKnown RBP13.13□□□□□ -0.31
PTPN6-220ENST00000543115 OGTO15294 1046 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 LRRN2O75325 713 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 BMP15O95972 392 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 LRG1P02750 347 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 CEBPBP17676 345 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 RFX1P22670 979 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 NMT1P30419 496 aaKnown RBP13.13□□□□□ -0.31
PTPN6-220ENST00000543115 ELF1P32519 619 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 CCR2P41597 374 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
PTPN6-220ENST00000543115 PTPAQ15257 358 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 PRSS36Q5K4E3 855 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 FAM173BQ6P4H8 233 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 MTSS1LQ765P7 747 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 TCEAL8Q8IYN2 117 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 LARP4BQ92615 738 aaKnown RBP13.13□□□□□ -0.31
PTPN6-220ENST00000543115 TCEAL4Q96EI5 215 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 EPSTI1Q96J88 318 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 CORO1BQ9BR76 489 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 PLA2G2FQ9BZM2 168 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 ZHX3Q9H4I2 956 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 AVENQ9NQS1 362 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-220ENST00000543115 UBQLN1Q9UMX0 589 aaKnown RBP13.13□□□□□ -0.31
PTPN6-220ENST00000543115 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 INSL5Q9Y5Q6 135 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 DOCK6Q96HP0 2047 aa13.13□□□□□ -0.31
PTPN6-220ENST00000543115 NOTCH4Q99466 2003 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 A0A0B4J269 797 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 ANKRD63C9JTQ0 380 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 M0QZQ0 153 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 VNN2O95498 520 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 KRT18P05783 430 aaKnown RBP13.12□□□□□ -0.31
PTPN6-220ENST00000543115 ADRB2P07550 413 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 OR4Q2P0C623 313 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 GLULP15104 373 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 PTPN2P17706 415 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 CYP3A5P20815 502 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 MARCKSP29966 332 aaPredicted RBP13.12□□□□□ -0.31
PTPN6-220ENST00000543115 AARSP49588 968 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPN6-220ENST00000543115 STARD6P59095 220 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 PPP2R3AQ06190 1150 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 ADCY1Q08828 1119 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 RESTQ13127 1097 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 ZC2HC1CQ53FD0 456 aaPredicted RBP13.12□□□□□ -0.31
PTPN6-220ENST00000543115 TPGS2Q68CL5 300 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 RNF19BQ6ZMZ0 732 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 MAP4K3Q8IVH8 894 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 APPL2Q8NEU8 664 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 PJA1Q8NG27 643 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 RASSF8Q8NHQ8 419 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 CEP72Q9P209 647 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
PTPN6-220ENST00000543115 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
PTPN6-220ENST00000543115 CPSF3Q9UKF6 684 aaKnown RBP13.12□□□□□ -0.31
PTPN6-220ENST00000543115 SIT1Q9Y3P8 196 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 MYO15AQ9UKN7 3530 aa13.12□□□□□ -0.31
PTPN6-220ENST00000543115 PDCD11Q14690 1871 aaKnown RBP13.11□□□□□ -0.31
PTPN6-220ENST00000543115 CPB1P15086 417 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 FCARP24071 287 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 DDIT3P35638 169 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 GTF2BQ00403 316 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 YWHAHQ04917 246 aaPredicted RBP13.11□□□□□ -0.31
PTPN6-220ENST00000543115 TWF1Q12792 350 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 SLC44A4Q53GD3 710 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 TANGO2Q6ICL3 276 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 FAM212AQ96EL1 285 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 MSTO1Q9BUK6 570 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 CRISPLD1Q9H336 500 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 RPF1Q9H9Y2 349 aaKnown RBP13.11□□□□□ -0.31
PTPN6-220ENST00000543115 GDE1Q9NZC3 331 aa13.11□□□□□ -0.31
PTPN6-220ENST00000543115 CITO14578 2027 aa13.1□□□□□ -0.31
PTPN6-220ENST00000543115 MYH15Q9Y2K3 1946 aa13.1□□□□□ -0.31
PTPN6-220ENST00000543115 SPTLC1O15269 473 aa13.1□□□□□ -0.31
PTPN6-220ENST00000543115 TBCAO75347 108 aaKnown RBP13.1□□□□□ -0.31
PTPN6-220ENST00000543115 MOSPD3O75425 235 aa13.1□□□□□ -0.31
PTPN6-220ENST00000543115 ECI2O75521 394 aa13.1□□□□□ -0.31
PTPN6-220ENST00000543115 OAZ2O95190 189 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms