RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 LRRCC1Q9C099 1032 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 ZDHHC5Q9C0B5 715 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 GPR88Q9GZN0 384 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 FAM124BQ9H5Z6 455 aaPredicted RBP3.69□□□□□ -1.82
CHD4-209ENST00000542717 JMJD4Q9H9V9 463 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 ASAH2Q9NR71 780 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 ITGB1BP2Q9UKP3 347 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 PCDHB2Q9Y5E7 798 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 MYH6P13533 1939 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 NCANO14594 1321 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 PHLPP2Q6ZVD8 1323 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CNTNAP2Q9UHC6 1331 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 K7ENP7 123 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 DDX39AO00148 427 aaKnown RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 MAGEB2O15479 319 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ZNF623O75123 536 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 NDUFS2O75306 463 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 C22orf31O95567 290 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 PARP1P09874 1014 aaKnown RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 FAM87AP0C7U9 286 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SNHG28P0DPA3 235 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ITGA4P13612 1032 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 MAOBP27338 520 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 KIF5BP33176 963 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 DCTP40126 519 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 MLH1P40692 756 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 CCR2P41597 374 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SCNN1GP51170 649 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 GALK1P51570 392 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 GPC3P51654 580 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ARPP19P56211 112 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ACTR2P61160 394 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 GHRHRQ02643 423 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 TRAF1Q13077 416 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 RUNX3Q13761 415 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 RAB33AQ14088 237 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 CRY1Q16526 586 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SKIDA1Q1XH10 827 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ZSCAN23Q3MJ62 389 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SGO2Q562F6 1265 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SYCP2LQ5T4T6 812 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 HES3Q5TGS1 186 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 INO80CQ6PI98 192 aaPredicted RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 XKR5Q6UX68 686 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SLC36A4Q6YBV0 504 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 NFXL1Q6ZNB6 911 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ARID3BQ8IVW6 561 aaPredicted RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 CLASRPQ8N2M8 674 aaKnown RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 TRIML1Q8N9V2 468 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 LNX1Q8TBB1 728 aaPredicted RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 BAHD1Q8TBE0 780 aaPredicted RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 BPIFB1Q8TDL5 484 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SSH3Q8TE77 659 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SSC4DQ8WTU2 575 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 APPBP2Q92624 585 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 CHFRQ96EP1 664 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 HSPA12BQ96MM6 686 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ZNF578Q96N58 590 aaPredicted RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 TRAIPQ9BWF2 469 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 DPH1Q9BZG8 443 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 INO80BQ9C086 356 aaPredicted RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 MIR1-1HGQ9H1L0 117 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 EPN3Q9H201 632 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 EBF3Q9H4W6 596 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 TRPV4Q9HBA0 871 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 IL21RQ9HBE5 538 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 CYP4F11Q9HBI6 524 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 FBRSL1Q9HCM7 1045 aaKnown RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 UBN1Q9NPG3 1134 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ZNF302Q9NR11 478 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 GKN1Q9NS71 199 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 ECHDC1Q9NTX5 307 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 GMIPQ9P107 970 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 FTSJ1Q9UET6 329 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 TPCN1Q9ULQ1 816 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 CEP131Q9UPN4 1083 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 EXOC6BQ9Y2D4 811 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 FNDC3AQ9Y2H6 1198 aaKnown RBP3.68□□□□□ -1.82
CHD4-209ENST00000542717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.68□□□□□ -1.82
CHD4-209ENST00000542717 CDY1Q9Y6F8 540 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 NBASA2RRP1 2371 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 SPG11Q96JI7 2443 aa3.68□□□□□ -1.82
CHD4-209ENST00000542717 PCDH15Q96QU1 1955 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ITPR2Q14571 2701 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ZFHX3Q15911 3703 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 A0A087X0B3 334 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 A0A1W2PRU2 124 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ARL5CA6NH57 179 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 MEI4A8MW99 385 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ZBTB5O15062 677 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ZBTB24O43167 697 aaPredicted RBP3.67□□□□□ -1.82
CHD4-209ENST00000542717 RFPL3O75679 317 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 EFEMP2O95967 443 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 ZNF883P0CG24 379 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 GLDCP23378 1020 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 GRK6P43250 576 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 NOVP48745 357 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 MCM2P49736 904 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 OXCT1P55809 520 aa3.67□□□□□ -1.82
CHD4-209ENST00000542717 SRSF11Q05519 484 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms