RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 EOMESO95936 686 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 CCDC175P0C221 793 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 REXO1L1PQ8IX06 675 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 CCDC94Q9BW85 323 aaPredicted RBP29.91■■■□□ 2.38
CCM2-218ENST00000541586 SERPING1P05155 500 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 FGFR1P11362 822 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 ARID5AQ03989 594 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 SURF1Q15526 300 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 ASIC2Q16515 512 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 AGMOQ6ZNB7 445 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 MRPL10Q7Z7H8 261 aaKnown RBP29.91■■■□□ 2.38
CCM2-218ENST00000541586 ZNF598Q86UK7 904 aaKnown RBP29.91■■■□□ 2.38
CCM2-218ENST00000541586 NPAS4Q8IUM7 802 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 WDR49Q8IV35 697 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 ACRBPQ8NEB7 543 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 OR5B17Q8NGF7 314 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 ACAP3Q96P50 834 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 RPF1Q9H9Y2 349 aaKnown RBP29.91■■■□□ 2.38
CCM2-218ENST00000541586 UBE2TQ9NPD8 197 aaPredicted RBP29.91■■■□□ 2.38
CCM2-218ENST00000541586 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.91■■■□□ 2.381e-6■■■■■ 98.5
CCM2-218ENST00000541586 RNF19AQ9NV58 838 aa29.91■■■□□ 2.38
CCM2-218ENST00000541586 CLTAP09496 248 aa29.9■■■□□ 2.38
CCM2-218ENST00000541586 ATP2A2P16615 1042 aaKnown RBP29.9■■■□□ 2.38
CCM2-218ENST00000541586 CYLC1P35663 651 aaPredicted RBP29.9■■■□□ 2.38
CCM2-218ENST00000541586 GRM5P41594 1212 aa29.9■■■□□ 2.38
CCM2-218ENST00000541586 DRAP1Q14919 205 aaPredicted RBP29.9■■■□□ 2.38
CCM2-218ENST00000541586 CCDC42Q96M95 316 aa29.9■■■□□ 2.38
CCM2-218ENST00000541586 ZBED2Q9BTP6 218 aa29.9■■■□□ 2.38
CCM2-218ENST00000541586 ELAC1Q9H777 363 aaKnown RBP29.9■■■□□ 2.38
CCM2-218ENST00000541586 TTC3P53804 2025 aa29.9■■■□□ 2.38
CCM2-218ENST00000541586 F8VZ95 297 aa29.89■■■□□ 2.38
CCM2-218ENST00000541586 CXCL8P10145 99 aa29.89■■■□□ 2.38
CCM2-218ENST00000541586 BMP8BP34820 402 aa29.89■■■□□ 2.38
CCM2-218ENST00000541586 EIF4A3P38919 411 aaKnown RBP29.89■■■□□ 2.38
CCM2-218ENST00000541586 BIRC3Q13489 604 aa29.89■■■□□ 2.38
CCM2-218ENST00000541586 KYAT1Q16773 422 aa29.89■■■□□ 2.38
CCM2-218ENST00000541586 IRF2BP2Q7Z5L9 587 aa29.89■■■□□ 2.38
CCM2-218ENST00000541586 GPR88Q9GZN0 384 aa29.89■■■□□ 2.38
CCM2-218ENST00000541586 RNF216Q9NWF9 866 aaPredicted RBP29.89■■■□□ 2.38
CCM2-218ENST00000541586 RECQL4O94761 1208 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 VNN1O95497 513 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 STAT1P42224 750 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 GATMP50440 423 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 AP3M2P53677 418 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 YARSP54577 528 aaKnown RBP29.88■■■□□ 2.37
CCM2-218ENST00000541586 TDRD12Q587J7 1177 aaKnown RBP29.88■■■□□ 2.37
CCM2-218ENST00000541586 C16orf45Q96MC5 204 aaPredicted RBP29.88■■■□□ 2.37
CCM2-218ENST00000541586 RSAD1Q9HA92 442 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 INPP5FQ9Y2H2 1132 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 HLA-DRAP01903 254 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 PNMA6AP0CW24 399 aaPredicted RBP29.88■■■□□ 2.37
CCM2-218ENST00000541586 MAPK8IP2Q13387 824 aaPredicted RBP29.88■■■□□ 2.37
CCM2-218ENST00000541586 ARHGAP44Q17R89 818 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 RASIP1Q5U651 963 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 HELQQ8TDG4 1101 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 NT5C1BQ96P26 610 aa29.88■■■□□ 2.37
CCM2-218ENST00000541586 SSU72P8A0A1W2PR75 194 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 IL18RAPO95256 599 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 SOX5P35711 763 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 PIK3CAP42336 1068 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 POU5F1Q01860 360 aaKnown RBP29.87■■■□□ 2.37
CCM2-218ENST00000541586 KLHL30Q0D2K2 578 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 ABI1Q8IZP0 508 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 CRIPAKQ8N1N5 446 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 SLC9A7Q96T83 725 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 GAD1Q99259 594 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 PI4K2AQ9BTU6 479 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 DEF6Q9H4E7 631 aa29.87■■■□□ 2.37
CCM2-218ENST00000541586 REXO2Q9Y3B8 237 aaKnown RBP29.87■■■□□ 2.37
CCM2-218ENST00000541586 EIF3CLB5ME19 914 aaKnown RBP29.86■■■□□ 2.37
CCM2-218ENST00000541586 MEFVO15553 781 aaPredicted RBP29.86■■■□□ 2.37
CCM2-218ENST00000541586 MLH1P40692 756 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 ASTE1Q2TB18 679 aaPredicted RBP29.86■■■□□ 2.37
CCM2-218ENST00000541586 NYAP1Q6ZVC0 841 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 TDHQ8IZJ6 230 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 PPM1KQ8N3J5 372 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 ZFP42Q96MM3 310 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 EIF3CQ99613 913 aaKnown RBP29.86■■■□□ 2.37
CCM2-218ENST00000541586 MTMR12Q9C0I1 747 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 GIT1Q9Y2X7 761 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 LAMA3Q16787 3333 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 ANK1P16157 1881 aa29.86■■■□□ 2.37
CCM2-218ENST00000541586 GRXCR1A8MXD5 290 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 ZC3H11AO75152 810 aaKnown RBP eCLIP29.85■■■□□ 2.37
CCM2-218ENST00000541586 AFF1P51825 1210 aaKnown RBP29.85■■■□□ 2.37
CCM2-218ENST00000541586 KIF11P52732 1056 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 DUOXA2Q1HG44 320 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 PAN2Q504Q3 1202 aaKnown RBP29.85■■■□□ 2.37
CCM2-218ENST00000541586 CLLU1OSQ5K130 101 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 EFCAB13Q8IY85 973 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 PHOSPHO2Q8TCD6 241 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 KAT5Q92993 513 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 ELMO3Q96BJ8 720 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 CXCL16Q9H2A7 254 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 UBN1Q9NPG3 1134 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 GFPT2O94808 682 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 PRKCIP41743 596 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 GLB1LQ6UWU2 654 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 HERC6Q8IVU3 1022 aa29.85■■■□□ 2.37
CCM2-218ENST00000541586 KREMEN1Q96MU8 473 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms