RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 TADA3O75528 432 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 TIMP1P01033 207 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 ATF7P17544 494 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-204ENST00000540846 BMS1Q14692 1282 aaKnown RBP13.42□□□□□ -0.26
SMAD3-204ENST00000540846 TMEM132AQ24JP5 1023 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 THNSL1Q8IYQ7 743 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 RNF10Q8N5U6 811 aaKnown RBP13.42□□□□□ -0.26
SMAD3-204ENST00000540846 FBXL13Q8NEE6 735 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 MNS1Q8NEH6 495 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 ANKRD7Q92527 254 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 SEMA4DQ92854 862 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 ADPGKQ9BRR6 497 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
SMAD3-204ENST00000540846 CARD6Q9BX69 1037 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 UBE2TQ9NPD8 197 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-204ENST00000540846 NAGPAQ9UK23 515 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 HES2Q9Y543 173 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 PTPRJQ12913 1337 aa13.42□□□□□ -0.26
SMAD3-204ENST00000540846 COL4A6Q14031 1691 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 ZC3H11AO75152 810 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 TACC1O75410 805 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 PARNO95453 639 aaKnown RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 CLTAP09496 248 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 STAG3L1P0CL83 205 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 DLATP10515 647 aaKnown RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 MATR3P43243 847 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 POU5F1Q01860 360 aaKnown RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 NAB2Q15742 525 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 SLC10A6Q3KNW5 377 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 PAPD7Q5XG87 772 aaKnown RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 DBF4BQ8NFT6 615 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 TAS1R2Q8TE23 839 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 POP1Q99575 1024 aaKnown RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 CXCL16Q9H2A7 254 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 FAM105AQ9NUU6 356 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 RBAKQ9NYW8 714 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 IPPQ9Y573 584 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 CAPN6Q9Y6Q1 641 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 MEIS3P2A8K0S8 358 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 EFCAB8A8MWE9 144 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 C9IYK1 514 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 FOXN3O00409 490 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 DDX3XO00571 662 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 ZNF623O75123 536 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 LRRN2O75325 713 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 CXCL8P10145 99 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 OSTNP61366 133 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 ARHGAP44Q17R89 818 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 WHAMMP3Q1A5X7 153 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 ZACNQ401N2 412 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 TWF2Q6IBS0 349 aaKnown RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 TRAPPC11Q7Z392 1133 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 MRPL10Q7Z7H8 261 aaKnown RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 SLC30A5Q8TAD4 765 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 SHC3Q92529 594 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 FAM84AQ96KN4 292 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 KREMEN1Q96MU8 473 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 NT5C1BQ96P26 610 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 ALS2CR12Q96Q35 445 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 ADAM2Q99965 735 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 TSPYL2Q9H2G4 693 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-204ENST00000540846 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 PDE11AQ9HCR9 933 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 RGS18Q9NS28 235 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 RAB20Q9NX57 234 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 SALL4Q9UJQ4 1053 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 PCDHB2Q9Y5E7 798 aa13.41□□□□□ -0.26
SMAD3-204ENST00000540846 TDRD15B5MCY1 1934 aaKnown RBP13.4□□□□□ -0.26
SMAD3-204ENST00000540846 A0A0U1RQF3 1178 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 RECQL4O94761 1208 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 MOCS3O95396 460 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 ATP1A1P05023 1023 aaKnown RBP13.4□□□□□ -0.26
SMAD3-204ENST00000540846 RFC2P35250 354 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 NAA30Q147X3 362 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-204ENST00000540846 KYAT1Q16773 422 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 XKR4Q5GH76 650 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 ALKBH5Q6P6C2 394 aaKnown RBP13.4□□□□□ -0.26
SMAD3-204ENST00000540846 ALKAL1Q6UXT8 129 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-204ENST00000540846 FAM71AQ8IYT1 594 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 CRIPAKQ8N1N5 446 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 LNX1Q8TBB1 728 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-204ENST00000540846 HELQQ8TDG4 1101 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 SNX27Q96L92 541 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 NOX5Q96PH1 765 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 FNBP1Q96RU3 617 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 CGRRF1Q99675 332 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 PACSIN1Q9BY11 444 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-204ENST00000540846 SNTG2Q9NY99 539 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 INTUQ9ULD6 942 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 JRKLQ9Y4A0 524 aa13.4□□□□□ -0.26
SMAD3-204ENST00000540846 CSF2RAP15509 400 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 MFAP3P55082 362 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 FAM189BP81408 668 aa13.39□□□□□ -0.27
SMAD3-204ENST00000540846 GCNT1Q02742 428 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms