RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 NAPGQ99747 312 aaPredicted RBP26.32■■□□□ 1.8
TTC3-225ENST00000540756 KLK14Q9P0G3 267 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 NXF1Q9UBU9 619 aaKnown RBP26.32■■□□□ 1.8
TTC3-225ENST00000540756 RECQL4O94761 1208 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 CD58P19256 250 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 ASPAP45381 313 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 NAP1L1P55209 391 aaKnown RBP26.32■■□□□ 1.8
TTC3-225ENST00000540756 NFX1Q12986 1120 aaKnown RBP26.32■■□□□ 1.8
TTC3-225ENST00000540756 RSPH3Q86UC2 560 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 SNX27Q96L92 541 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 ST3GAL5Q9UNP4 418 aa26.32■■□□□ 1.8
TTC3-225ENST00000540756 H2AFZP0C0S5 128 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 ABCB4P21439 1286 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 TBXAS1P24557 533 aaPredicted RBP26.31■■□□□ 1.8
TTC3-225ENST00000540756 POLR2BP30876 1174 aaKnown RBP26.31■■□□□ 1.8
TTC3-225ENST00000540756 SSTR3P32745 418 aaPredicted RBP26.31■■□□□ 1.8
TTC3-225ENST00000540756 PDE6CP51160 858 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 ARHGEF6Q15052 776 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 H2AFVQ71UI9 128 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 UBR7Q8N806 425 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 FAM81BQ96LP2 452 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 NIF3L1Q9GZT8 377 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 AGO3Q9H9G7 860 aaKnown RBP26.31■■□□□ 1.8
TTC3-225ENST00000540756 CFHP08603 1231 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 CDR2Q01850 454 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 SMG8Q8ND04 991 aaKnown RBP26.31■■□□□ 1.8
TTC3-225ENST00000540756 DPP3Q9NY33 737 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 C2CD2Q9Y426 696 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 RALGAPA2Q2PPJ7 1873 aa26.31■■□□□ 1.8
TTC3-225ENST00000540756 SCN1AP35498 2009 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 RPS6KA5O75582 802 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 RAP1GAPP47736 663 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 WDR72Q3MJ13 1102 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 TWF2Q6IBS0 349 aaKnown RBP26.3■■□□□ 1.8
TTC3-225ENST00000540756 ALKAL1Q6UXT8 129 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 ARRDC4Q8NCT1 418 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 C18orf25Q96B23 403 aaPredicted RBP26.3■■□□□ 1.8
TTC3-225ENST00000540756 GLT1D1Q96MS3 346 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 UNC93B1Q9H1C4 597 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 IPPQ9Y573 584 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 MRFAP1Q9Y605 127 aa26.3■■□□□ 1.8
TTC3-225ENST00000540756 MKI67P46013 3256 aaKnown RBP26.3■■□□□ 1.8
TTC3-225ENST00000540756 PRMT2P55345 433 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 ZNF394Q53GI3 561 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 ZNF710Q8N1W2 664 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 RBBP8NLQ8NC74 664 aaPredicted RBP26.29■■□□□ 1.8
TTC3-225ENST00000540756 THAP2Q9H0W7 228 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 TRPV6Q9H1D0 765 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 TUBGCP4Q9UGJ1 667 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 AGAP1Q9UPQ3 857 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 CNTN6Q9UQ52 1028 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 A0A1W2PQ45 241 aaPredicted RBP26.29■■□□□ 1.8
TTC3-225ENST00000540756 A0A1W2PQY0 241 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 TACC1O75410 805 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 CABYRO75952 493 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 FTLP02792 175 aaPredicted RBP26.29■■□□□ 1.8
TTC3-225ENST00000540756 CDH8P55286 799 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 APBB1IPQ7Z5R6 666 aaPredicted RBP26.29■■□□□ 1.8
TTC3-225ENST00000540756 RPAINQ86UA6 219 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 TXLNBQ8N3L3 684 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 ARHGEF26Q96DR7 871 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 NOX5Q96PH1 765 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 CISHQ9NSE2 258 aa26.29■■□□□ 1.8
TTC3-225ENST00000540756 MOXD2PA6NHM9 499 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 PPEF2O14830 753 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 YARSP54577 528 aaKnown RBP26.28■■□□□ 1.8
TTC3-225ENST00000540756 AMPD2Q01433 879 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 NAA30Q147X3 362 aaPredicted RBP26.28■■□□□ 1.8
TTC3-225ENST00000540756 RNF10Q8N5U6 811 aaKnown RBP26.28■■□□□ 1.8
TTC3-225ENST00000540756 TRIM58Q8NG06 486 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.28■■□□□ 1.82e-10■□□□□ 9.5
TTC3-225ENST00000540756 SDCBP2Q9H190 292 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 GOLPH3Q9H4A6 298 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 PLEKHA5Q9HAU0 1116 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 PARP2Q9UGN5 583 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 CHORDC1Q9UHD1 332 aaPredicted RBP26.28■■□□□ 1.8
TTC3-225ENST00000540756 NOD1Q9Y239 953 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 PCDHB2Q9Y5E7 798 aa26.28■■□□□ 1.8
TTC3-225ENST00000540756 PDCD11Q14690 1871 aaKnown RBP26.28■■□□□ 1.8
TTC3-225ENST00000540756 MEIS3P2A8K0S8 358 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 PALMO75781 387 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 TERF1P54274 439 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 TRIM71Q2Q1W2 868 aaKnown RBP26.27■■□□□ 1.8
TTC3-225ENST00000540756 OSGEPQ9NPF4 335 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 NCK2O43639 380 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 SRGAP2O75044 1071 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 GHRP10912 638 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 MTFR1Q15390 333 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 ZBTB6Q15916 424 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 ISCUQ9H1K1 167 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 SMYD3Q9H7B4 428 aa26.27■■□□□ 1.8
TTC3-225ENST00000540756 CD52P31358 61 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 NOP2P46087 812 aaKnown RBP26.26■■□□□ 1.79
TTC3-225ENST00000540756 ZNF132P52740 706 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 ZNF667Q5HYK9 610 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 CD302Q8IX05 232 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 HPDLQ96IR7 371 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 BEGAINQ9BUH8 593 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 CARD6Q9BX69 1037 aa26.26■■□□□ 1.79
TTC3-225ENST00000540756 CNTN3Q9P232 1028 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms