RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SNTG2Q9NY99 539 aa15.32■□□□□ 0.04
CYB561A3-216ENST00000540755 SQORQ9Y6N5 450 aa15.32■□□□□ 0.04
CYB561A3-216ENST00000540755 ZNF263O14978 683 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 GPR182O15218 404 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 ASS1P00966 412 aaKnown RBP15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 CST3P01034 146 aaPredicted RBP15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 PNMA6AP0CW24 399 aaPredicted RBP15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 YARSP54577 528 aaKnown RBP15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 NOP14P78316 857 aaKnown RBP15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 PTK2Q05397 1052 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 TRPC3Q13507 836 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 TMEM132DQ14C87 1099 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 SLC18A3Q16572 532 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 SGSM1Q2NKQ1 1148 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 FBXO47Q5MNV8 452 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 DNTTIP2Q5QJE6 756 aaKnown RBP15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 ZNF571Q7Z3V5 609 aaPredicted RBP15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 VPS36Q86VN1 386 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 FAM71AQ8IYT1 594 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 SNX27Q96L92 541 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 TSPAN18Q96SJ8 248 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 ST3GAL5Q9UNP4 418 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 PRUNE2Q8WUY3 3088 aa15.31■□□□□ 0.04
CYB561A3-216ENST00000540755 VAV2P52735 878 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 FAAP100Q0VG06 881 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 CUL2Q13617 745 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 BMS1Q14692 1282 aaKnown RBP15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 TWF2Q6IBS0 349 aaKnown RBP15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 TXLNBQ8N3L3 684 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 C1orf127Q8N9H9 656 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 USP38Q8NB14 1042 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 TAF4BQ92750 862 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 FAXDC2Q96IV6 333 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 NXF3Q9H4D5 531 aaKnown RBP15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 ERVK-5Q9HDB9 667 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 TBX21Q9UL17 535 aa15.3■□□□□ 0.04
CYB561A3-216ENST00000540755 RECQL4O94761 1208 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 TNNT1P13805 278 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 ARHGAP25P42331 645 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 CDK7P50613 346 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 MYL6P60660 151 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 CYP27A1Q02318 531 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 GFPT1Q06210 699 aaPredicted RBP15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 ARHGAP29Q52LW3 1261 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 XKR4Q5GH76 650 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 SPOPLQ6IQ16 392 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 ALKAL1Q6UXT8 129 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 KIAA1328Q86T90 577 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 CXorf38Q8TB03 319 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 TOX2Q96NM4 488 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 SYT11Q9BT88 431 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 IFIH1Q9BYX4 1025 aaKnown RBP15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 LUC7LQ9NQ29 371 aaKnown RBP15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 CNTN3Q9P232 1028 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 SIX4Q9UIU6 781 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 ITGA11Q9UKX5 1188 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 IPPQ9Y573 584 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 NUB1Q9Y5A7 615 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 PCDHA13Q9Y5I0 950 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 ATP8B3O60423 1300 aa15.29■□□□□ 0.04
CYB561A3-216ENST00000540755 A0A087X0T9 212 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 FAM228BP0C875 321 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 CKBP12277 381 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 VCANP13611 3396 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 ATICP31939 592 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 NFX1Q12986 1120 aaKnown RBP15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 PAK2Q13177 524 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 LPIN1Q14693 890 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 C10orf76Q5T2E6 689 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 ZNF618Q5T7W0 954 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 SMG8Q8ND04 991 aaKnown RBP15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 OLIG1Q8TAK6 271 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 CAGE1Q8TC20 777 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 KIF12Q96FN5 646 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 TSGA10Q9BZW7 698 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 NIF3L1Q9GZT8 377 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 TRPV6Q9H1D0 765 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 VRTNQ9H8Y1 702 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 AGO3Q9H9G7 860 aaKnown RBP15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 LZTFL1Q9NQ48 299 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 ADAMTS1Q9UHI8 967 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 NENFQ9UMX5 172 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 HES2Q9Y543 173 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 PAXBP1Q9Y5B6 917 aa15.28■□□□□ 0.04
CYB561A3-216ENST00000540755 A0A0U1RQJ8 604 aa15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 STAU1O95793 577 aaKnown RBP15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 ACO1P21399 889 aaKnown RBP15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 USP8P40818 1118 aa15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 MAGEA1P43355 309 aa15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 ETF1P62495 437 aaKnown RBP15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 ZBTB6Q15916 424 aa15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 ZNF699Q32M78 642 aa15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 SCARA3Q6AZY7 606 aa15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 TRAF7Q6Q0C0 670 aa15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 FAM126BQ8IXS8 530 aa15.27■□□□□ 0.04
CYB561A3-216ENST00000540755 UBR7Q8N806 425 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms